RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 AP3B1O00203 1094 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 VILLO15195 856 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 CRTAMO95727 393 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 PCCBP05166 539 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 SYPP08247 313 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 GM2AP17900 193 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TPSB2P20231 275 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 IGFALSP35858 605 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 ADCY8P40145 1251 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TERF1P54274 439 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 SARNPP82979 210 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 C2orf54Q08AI8 447 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 MTM1Q13496 603 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TPSAB1Q15661 275 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 ZNF765Q7L2R6 523 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TMC3Q7Z5M5 1100 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TECPR1Q7Z6L1 1165 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 ABI3BPQ7Z7G0 1075 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 JAMLQ86YT9 394 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 DCLK2Q8N568 766 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 MNS1Q8NEH6 495 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 OR52K1Q8NGK4 314 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 CDH19Q9H159 772 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 CAPN10Q9HC96 672 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 MBNL1Q9NR56 388 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 MRFAP1Q9Y605 127 aa19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 TP53BP1Q12888 1972 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-216ENST00000626660 A0A1B0GVT2 93 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 POM121BA6NF01 834 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 H0Y8X5 98 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 TOR1BO14657 336 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 THEGLP0DJG4 465 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 DEKP35659 375 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 HMGCLP35914 325 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 RABIFP47224 123 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 SPINT3P49223 89 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 PDE1BQ01064 536 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 TAF1AQ15573 450 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 KCTD19Q17RG1 926 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 ESRP1Q6NXG1 681 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 LAYNQ6UX15 382 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 MAATS1Q7Z4T9 603 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 DCP2Q8IU60 420 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 TTC30BQ8N4P2 665 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 BRSK1Q8TDC3 778 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 AP2M1Q96CW1 435 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 BMFQ96LC9 184 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 ZDHHC5Q9C0B5 715 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 ABCG8Q9H221 673 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 CD84Q9UIB8 345 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 ANKRD6Q9Y2G4 727 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 PKP3Q9Y446 797 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 GVINP1Q7Z2Y8 2422 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 ADAMTS9Q9P2N4 1935 aa19.07■□□□□ 0.64
SQSTM1-216ENST00000626660 TLR4O00206 839 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 STX7O15400 261 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 TTI1O43156 1089 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 WNT1P04628 370 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 PYGLP06737 847 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 TSHRP16473 764 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 TPH1P17752 444 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 LPOP22079 712 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 MAGEA6P43360 314 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 ATXN3P54252 364 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 YPEL5P62699 121 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 IRX4P78413 519 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 DPTQ07507 201 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 SEPT6Q14141 434 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 KCNJ11Q14654 390 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 SF3A2Q15428 464 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 RAET1GQ6H3X3 334 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 TCEAL6Q6IPX3 200 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 IL27RAQ6UWB1 636 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 Q6ZSR6 202 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 OR13H1Q8NG92 308 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 TCEAL3Q969E4 200 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 FAM83DQ9H4H8 585 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 PARD6AQ9NPB6 346 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 CASS4Q9NQ75 786 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 PIH1D1Q9NWS0 290 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 SCN8AQ9UQD0 1980 aa19.06■□□□□ 0.64
SQSTM1-216ENST00000626660 FAM187AA6NFU0 413 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 ARHGAP33O14559 1287 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 AURKAO14965 403 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 PPFIA2O75334 1257 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 GPR1P46091 355 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 THOP1P52888 689 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 DCDC1P59894 354 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 GRIK2Q13002 908 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 LAMB3Q13751 1172 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 INPP5AQ14642 412 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 POU6F1Q14863 301 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 ZDHHC20Q5W0Z9 365 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 PNCKQ6P2M8 343 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 PRR23CQ6ZRP0 262 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 RFLNAQ6ZTI6 216 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 PCGF5Q86SE9 256 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 NLRP8Q86W28 1048 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 PPIL6Q8IXY8 311 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms