RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CELF5Q8N6W0 485 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 LRRC57Q8N9N7 239 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ACSS2Q9NR19 701 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 KRT84Q9NSB2 600 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 MIOSQ9NXC5 875 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 BLOC1S6Q9UL45 172 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 TBC1D30Q9Y2I9 924 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 OR10H1Q9Y4A9 318 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 PITPNM1O00562 1244 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 FAM155BO75949 473 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 MLYCDO95822 493 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 HAPLN1P10915 354 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 GTF2E2P29084 291 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 LRPAP1P30533 357 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ACVRL1P37023 503 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 SSR2P43308 183 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TBL3Q12788 808 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 IRF5Q13568 498 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 MORN1Q5T089 497 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 OTUD3Q5T2D3 398 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 RNASEH2BQ5TBB1 312 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 CYP2R1Q6VVX0 501 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 GPRIN3Q6ZVF9 776 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 EIF1ADQ8N9N8 165 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 ZFYVE19Q96K21 471 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 C1orf50Q9BV19 199 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 HSD3B7Q9H2F3 369 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 SLCO1B3Q9NPD5 702 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ADAMTS5Q9UNA0 930 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 PMM2O15305 246 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TEX28O15482 410 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A9O60656 530 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 CNMDO75829 334 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 LRATO95237 230 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 OTCP00480 354 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TYRP14679 529 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TCF4P15884 667 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A6P19224 532 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 EPORP19235 508 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A1P22309 533 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A4P22310 534 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 NTSP30990 170 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A3P35503 534 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A5P35504 534 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 HPCAL1P37235 193 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ACTR1BP42025 376 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TM4SF4P48230 202 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ACTR1AP61163 376 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 MPP1Q00013 466 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 OCA2Q04671 838 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 RCN1Q15293 331 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 DPYSL2Q16555 572 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TTC27Q6P3X3 843 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TMEM220Q6QAJ8 160 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TMPRSS11BQ86T26 416 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 PCDH20Q8N6Y1 951 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 HEXDCQ8WVB3 486 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 USP7Q93009 1102 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TADA1Q96BN2 335 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 TPD52L3Q96J77 140 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 KCTD14Q9BQ13 255 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 MECRQ9BV79 373 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 BCO2Q9BYV7 579 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A7Q9HAW7 530 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A10Q9HAW8 530 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 UGT1A8Q9HAW9 530 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 KCTD5Q9NXV2 234 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 CBX6O95503 412 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 RHOP08100 348 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ENO2P09104 434 aaPredicted RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 CDH3P22223 829 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 EPHA3P29320 983 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 CCT8P50990 548 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 FRG1Q14331 258 aaKnown RBP9.23□□□□□ -0.93
GGA3-223ENST00000621870 ARSIQ5FYB1 569 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 STX19Q8N4C7 294 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ACMSDQ8TDX5 336 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 NTAN1Q96AB6 310 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 PHF21AQ96BD5 680 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 HBEGFQ99075 208 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 ADAMTS10Q9H324 1103 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 C4BP0C0L5 1744 aa9.23□□□□□ -0.93
GGA3-223ENST00000621870 STRCQ7RTU9 1775 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 URADA6NGE7 173 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 C16orf96A6NNT2 1141 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PIRO00625 290 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 TPSB2P20231 275 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ALAS2P22557 587 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 GSSP48637 474 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 DHPSP49366 369 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 IRX1P78414 480 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 TPSAB1Q15661 275 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 UPP1Q16831 310 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HECTD2Q5U5R9 776 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 CAPN13Q6MZZ7 669 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 CCDC81Q6ZN84 652 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms