RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 BCL2L14Q9BZR8 327 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 BRINP2Q9C0B6 783 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ABCG8Q9H221 673 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 LHX5Q9H2C1 402 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 REEP1Q9H902 201 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 NMUR1Q9HB89 426 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 NINJ2Q9NZG7 142 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 FBXO5Q9UKT4 447 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 VPS4AQ9UN37 437 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SATB2Q9UPW6 733 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 PCDHB1Q9Y5F3 818 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 RCCD1A6NED2 376 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 NRP1O14786 923 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 MGRN1O60291 552 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SERPINB7O75635 380 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 UNC5CO95185 931 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC35G6P0C7Q6 338 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 BMP7P18075 431 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CCND3P30281 292 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CASRP41180 1078 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 BUD31P41223 144 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CYP4F2P78329 520 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 PTSQ03393 145 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 MBTD1Q05BQ5 628 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 WDR45BQ5MNZ6 344 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 C9orf64Q5T6V5 341 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CHST15Q7LFX5 561 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ZCCHC9Q8N567 271 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CDYL2Q8N8U2 506 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ITFG1Q8TB96 612 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF296Q8WUU4 475 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CKAP2Q8WWK9 683 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 JSRP1Q96MG2 331 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 RNF145Q96MT1 663 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 AARSD1Q9BTE6 412 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 MMADHCQ9H3L0 296 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TM7SF2O76062 418 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 RAB10P61026 200 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 RPL38P63173 70 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CELF5Q8N6W0 485 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 APOL4Q9BPW4 351 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 ELL3Q9HB65 397 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 PRKAB1Q9Y478 270 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 FCHO1O14526 889 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MYL12BO14950 172 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 AHCYL1O43865 530 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 PEX11AO75192 247 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CILPO75339 1184 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CBX6O95503 412 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CCNYL3P0C7X3 344 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 DDX6P26196 483 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 SERPINB1P30740 379 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 ARL2P36404 184 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MTHFRP42898 656 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MAPKAPK2P49137 400 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 SMIM11AP58511 58 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 TSNQ15631 228 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 ARMC8Q8IUR7 673 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 DEFB107AQ8IZN7 70 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 TCAIMQ8N3R3 496 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 GLIS3Q8NEA6 775 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 SRMSQ9H3Y6 488 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 DNAJC28Q9NX36 388 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MCM8Q9UJA3 840 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MAP2P11137 1827 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM20BO75063 409 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 STX11O75558 287 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 RECQL5O94762 991 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 NDST3O95803 873 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 LDLRP01130 860 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 PBX1P40424 430 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 PRKCIP41743 596 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 OASLQ15646 514 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MSANTD2Q6P1R3 559 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 BBS12Q6ZW61 710 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 DNAJB7Q7Z6W7 309 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CFAP206Q8IYR0 622 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 C2orf73Q8N5S3 287 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 OR4K2Q8NGD2 314 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 NELL1Q92832 810 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 OXNAD1Q96HP4 312 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 TMEM175Q9BSA9 504 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MCMBPQ9BTE3 642 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 ABCB8Q9NUT2 735 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 COPS7AQ9UBW8 275 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 HEBP2Q9Y5Z4 205 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 WWP2O00308 870 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 ZSCAN5DPP0CG00 497 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 AGXTP21549 392 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 CTSOP43234 321 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 AVPR1BP47901 424 aa9.78□□□□□ -0.84
CLTCL1-211ENST00000621271 MAPKAPK3Q16644 382 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms