RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CCL4P13236 92 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 KELP23276 732 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 HNRNPH3P31942 346 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 MMP12P39900 470 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 NOMO3P69849 1222 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 HLTFQ14527 1009 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLK1-215ENST00000621181 C16orf72Q14CZ0 275 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 MAN2A1Q16706 1144 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 PAPD7Q5XG87 772 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 STRADAQ7RTN6 431 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 PHLDB2Q86SQ0 1253 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 NOP9Q86U38 636 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 LURAP1LQ8IV03 231 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 CCDC185Q8N715 623 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 RTL3Q8N8U3 475 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 PLA2G15Q8NCC3 412 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 RCBTB1Q8NDN9 531 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 FAM172AQ8WUF8 416 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 OR1E3Q8WZA6 343 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ZNF641Q96N77 438 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 MAGEB5Q9BZ81 275 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 B3GNT4Q9C0J1 378 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 NDST4Q9H3R1 872 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 CYP4F12Q9HCS2 524 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 FGF22Q9HCT0 170 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ATP8A1Q9Y2Q0 1164 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ZFC3H1O60293 1989 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 A0A1W2PQJ5 194 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 RCCD1A6NED2 376 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 C2CD4BA6NLJ0 364 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 RASA4BC9J798 803 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 RASA4O43374 803 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 CREB3O43889 395 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 RECQL5O94762 991 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 PRKCGP05129 697 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ELFN1P0C7U0 828 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 MAZP56270 477 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 POLE2P56282 527 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 HDAC4P56524 1084 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 YBEYP58557 167 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 KIAA1024LP59773 190 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 KCNAB2Q13303 367 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 SERINC3Q13530 473 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 UBAP2LQ14157 1087 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 AGERQ15109 404 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 PARP15Q460N3 678 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 EFHC2Q5JST6 749 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ZNF771Q7L3S4 317 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 SLFN11Q7Z7L1 901 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 CAMK1DQ8IU85 385 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 FAM114A1Q8IWE2 563 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 PYROXD2Q8N2H3 581 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 NOA1Q8NC60 698 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 CCL4L1Q8NHW4 92 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 ZNF564Q8TBZ8 553 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 HCAR2Q8TDS4 363 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 FUBP1Q96AE4 644 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 NUDT22Q9BRQ3 303 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 TUBGCP2Q9BSJ2 902 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 SLC12A9Q9BXP2 914 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 EPN3Q9H201 632 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 HAUS4Q9H6D7 363 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 NOL6Q9H6R4 1146 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 WDR26Q9H7D7 661 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 LHX3Q9UBR4 397 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 UBA2Q9UBT2 640 aaPredicted RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 TRIM10Q9UDY6 481 aa7.85□□□□□ -1.15
CLK1-215ENST00000621181 LUC7L2Q9Y383 392 aaKnown RBP7.85□□□□□ -1.15
CLK1-215ENST00000621181 TSPAN11A1L157 253 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 PRSS38A1L453 326 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 EIF3CLB5ME19 914 aaKnown RBP7.84□□□□□ -1.15
CLK1-215ENST00000621181 F8VZ95 297 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 H3BQF6 201 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 PDE2AO00408 941 aaPredicted RBP7.84□□□□□ -1.15
CLK1-215ENST00000621181 TNFRSF10CO14798 259 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 UCHL3P15374 230 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 MMP8P22894 467 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 SERPINA4P29622 427 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 OAS2P29728 719 aaKnown RBP7.84□□□□□ -1.15
CLK1-215ENST00000621181 PTPN9P43378 593 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 CCR10P46092 362 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 KLK7P49862 253 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 OR1D5P58170 312 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 ZBED6P86452 979 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 ILF3Q12906 894 aaKnown RBP eCLIP7.84□□□□□ -1.151e-7■■■■■ 26.8
CLK1-215ENST00000621181 SKIDA1Q1XH10 827 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 VWA3BQ502W6 1294 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 KLHDC7AQ5VTJ3 777 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 WDR93Q6P2C0 686 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 JOSD2Q8TAC2 188 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 SLC30A5Q8TAD4 765 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 ART4Q93070 314 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 NKD1Q969G9 470 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms