RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 DFFAO00273 331 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 AREL1O15033 823 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 HCAR3P49019 387 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 CARSP49589 748 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 PAPOLAP51003 745 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 DRG2P55039 364 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 EIF3EP60228 445 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 PFN3P60673 137 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 EIF2B5Q13144 721 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 PTK2BQ14289 1009 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 TCEA2Q15560 299 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 CDKN3Q16667 212 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 FAXCQ5TGI0 409 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 LRRC69Q6ZNQ3 347 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 IFI44Q8TCB0 444 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 MAPK15Q8TD08 544 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 CCHCR1Q8TD31 782 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 ASB12Q8WXK4 309 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 VOPP1Q96AW1 172 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 CRELD1Q96HD1 420 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 IL12RB2Q99665 862 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 TRIM31Q9BZY9 425 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 SLC39A8Q9C0K1 460 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 NRSN2Q9GZP1 204 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 DPH5Q9H2P9 285 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 TCEAL2Q9H3H9 227 aaPredicted RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 SCUBE2Q9NQ36 999 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 MBNL1Q9NR56 388 aaKnown RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 GPR27Q9NS67 375 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 DONSONQ9NYP3 566 aa16.18■□□□□ 0.18
CD40-207ENST00000620709 SAE1Q9UBE0 346 aaPredicted RBP16.18■□□□□ 0.18
CD40-207ENST00000620709 TLX3O43711 291 aaPredicted RBP16.17■□□□□ 0.18
CD40-207ENST00000620709 OPA1O60313 960 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 BRINP1O60477 761 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 PRKCGP05129 697 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 MYBL2P10244 700 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 ABCG1P45844 678 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 NR2C2P49116 596 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 NDST2P52849 883 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 DPYSQ14117 519 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 HLTFQ14527 1009 aaKnown RBP eCLIP16.17■□□□□ 0.18
CD40-207ENST00000620709 PRRT3Q5FWE3 981 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 NCBP2-AS2Q69YL0 99 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 CRTC1Q6UUV9 634 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 NPNTQ6UXI9 565 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 GSPT2Q8IYD1 628 aaKnown RBP16.17■□□□□ 0.18
CD40-207ENST00000620709 DCBLD1Q8N8Z6 715 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 CCDC89Q8N998 374 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 BTN2A2Q8WVV5 523 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 CENPTQ96BT3 561 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 SUV39H2Q9H5I1 410 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 SP110Q9HB58 689 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 SPASTQ9UBP0 616 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 DKK3Q9UBP4 350 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 APOBEC3BQ9UH17 382 aaKnown RBP16.17■□□□□ 0.18
CD40-207ENST00000620709 ASIC3Q9UHC3 531 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 MFHAS1Q9Y4C4 1052 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 PCDHB1Q9Y5F3 818 aa16.17■□□□□ 0.18
CD40-207ENST00000620709 PRAMEF11O60813 436 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 RBP3P10745 1247 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 AMPD1P23109 780 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 ITPKBP27987 946 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 HTR7P34969 479 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 ELP6Q0PNE2 266 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 COL9A2Q14055 689 aaPredicted RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 RTP5Q14D33 572 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 IRF4Q15306 451 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 BEND6Q5SZJ8 279 aaPredicted RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 ZCCHC8Q6NZY4 707 aaKnown RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 EMBQ6PCB8 327 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 BZW1Q7L1Q6 419 aaKnown RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 EFL1Q7Z2Z2 1120 aaKnown RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 RD3Q7Z3Z2 195 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 PHACTR4Q8IZ21 702 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 AENQ8WTP8 325 aaKnown RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 CINPQ9BW66 212 aaPredicted RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 CPEB1Q9BZB8 566 aaKnown RBP16.16■□□□□ 0.18
CD40-207ENST00000620709 FAM129AQ9BZQ8 928 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 SLC13A1Q9BZW2 595 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 PDFQ9HBH1 243 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 NFU1Q9UMS0 254 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 DOLKQ9UPQ8 538 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 HEY1Q9Y5J3 304 aa16.16■□□□□ 0.18
CD40-207ENST00000620709 LOC400499M0QZD8 3231 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 A0A087WV48 116 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 H7C0C1 242 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 RRP8O43159 456 aaKnown RBP16.15■□□□□ 0.18
CD40-207ENST00000620709 LZTS3O60299 673 aaPredicted RBP16.15■□□□□ 0.18
CD40-207ENST00000620709 KRT14P02533 472 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 ERCC2P18074 760 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 ATP5OP48047 213 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 XRCC4Q13426 336 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 LRRC14Q15048 493 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 NR0B2Q15466 257 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 TMEM52BQ4KMG9 183 aa16.15■□□□□ 0.18
CD40-207ENST00000620709 GUSBP11Q6P575 273 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms