RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SEC24AO95486 1093 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 ALPPL2P10696 532 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NAGLUP54802 743 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CRADDP78560 199 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MEA1Q16626 185 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 WDR59Q6PJI9 974 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 DUSP16Q9BY84 665 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 F8VP50 259 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 LRATO95237 230 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 VIPP01282 170 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NR2F6P10588 404 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PTPRAP18433 802 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 ALAS2P22557 587 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MC4RP32245 332 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 TMPRSS11BQ86T26 416 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NAT16Q8N8M0 369 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MYO19Q96H55 970 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 GULP1Q9UBP9 304 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 GATBO75879 557 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NFATC1O95644 943 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 FKBP1BP68106 108 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PIK3R6Q5UE93 754 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 KBTBD7Q8WVZ9 684 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 DERAQ9Y315 318 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 IL12BP29460 328 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 SMAD3P84022 425 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 GPN1Q9HCN4 374 aaPredicted RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 FKBP14Q9NWM8 211 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PTCH2Q9Y6C5 1203 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 DCCP43146 1447 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NCOA3Q9Y6Q9 1424 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PER2O15055 1255 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CTPS1P17812 591 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 BEND5Q7L4P6 421 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 FBXO22Q8NEZ5 403 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CCNB1IP1Q9NPC3 277 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 MRPS17Q9Y2R5 130 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PCDHB1Q9Y5F3 818 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 WRBO00258 174 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 RASGRP1O95267 797 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 CERCAMQ5T4B2 595 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 BICRALQ6AI39 1079 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 POTEHQ6S545 545 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 SRFBP1Q8NEF9 429 aaKnown RBP11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 LACRTQ9GZZ8 138 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 ITGB1BP2Q9UKP3 347 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF879B4DU55 563 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC22A3O75751 556 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 UBXN7O94888 489 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 ALDH3A2P51648 485 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 RPS6KA3P51812 740 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 PRR5P85299 388 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 TRAP1Q12931 704 aaKnown RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 LAPTM5Q13571 262 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 ACAP2Q15057 778 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 CCNYL2Q5T2Q4 361 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 UBE2R2Q712K3 238 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 LEMD2Q8NC56 503 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC9A6Q92581 669 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 DNASE1L2Q92874 299 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 IDI2Q9BXS1 227 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 DHRS12A0PJE2 317 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 PEX11AO75192 247 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 GOT1P17174 413 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 PTPN5P54829 565 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 CCL23P55773 120 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 HSF2Q03933 536 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 MED22Q15528 200 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 NAIF1Q69YI7 327 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 CHST15Q7LFX5 561 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 BTN2A3PQ96KV6 586 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 EQTNQ9NQ60 294 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 HEBP2Q9Y5Z4 205 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 C22orf31O95567 290 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 LINC00032P0C843 101 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 GABRR2P28476 465 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 SCRN3Q0VDG4 424 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 TBX2Q13207 712 aaPredicted RBP11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 HKDC1Q2TB90 917 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
CCDC144B-208ENST00000618081 CRTC3Q6UUV7 619 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms