RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 LCLAT1Q6UWP7 414 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CLEC20AQ6ZU45 233 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 RSRC2Q7L4I2 434 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 PEG10Q86TG7 708 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 LUZP1Q86V48 1076 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 PIGZQ86VD9 579 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 RASSF3Q86WH2 238 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ERICH1Q86X53 443 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 DHX40Q8IX18 779 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CMTM8Q8IZV2 173 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ARL14EPQ8N8R7 260 aaPredicted RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CCDC26Q8TAB7 109 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ITFG1Q8TB96 612 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 BPIFB1Q8TDL5 484 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 IPO4Q8TEX9 1081 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 SLC35F5Q8WV83 523 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ING5Q8WYH8 240 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ANP32BQ92688 251 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 FCRL4Q96PJ5 515 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ERGIC2Q96RQ1 377 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 MYADMQ96S97 322 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 PNKPQ96T60 521 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 PKMYT1Q99640 499 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 SMOQ99835 787 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 FUCA2Q9BTY2 467 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 TRIM5Q9C035 493 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 LHX5Q9H2C1 402 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 LDAHQ9H6V9 325 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 KIF9Q9HAQ2 790 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CNGB3Q9NQW8 809 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 FAM207AQ9NSI2 230 aaPredicted RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 OBP2AQ9NY56 170 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 WNT16Q9UBV4 365 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 LSM7Q9UK45 103 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 MYO6Q9UM54 1294 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 CNTN6Q9UQ52 1028 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 SCML2Q9UQR0 700 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ZNF510Q9Y2H8 683 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 MRPS17Q9Y2R5 130 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 LUC7L2Q9Y383 392 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 BZW2Q9Y6E2 419 aaKnown RBP4.48□□□□□ -1.69
MALAT1-210ENST00000617489 VWA8A3KMH1 1905 aa4.48□□□□□ -1.69
MALAT1-210ENST00000617489 ANKRD62A6NC57 917 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 ZNF840PA6NDX5 716 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 HEPACAM2A8MVW5 462 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 CHADO15335 359 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 MPPED1O15442 326 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 BEST1O76090 585 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 GFPT2O94808 682 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 RARGP13631 454 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 GLULP15104 373 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 CYP11B1P15538 503 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 ZNF18P17022 549 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 HMGA1P17096 107 aaKnown RBP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 GDI1P31150 447 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 CHKAP35790 457 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 IFNAR2P48551 515 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 HARS2P49590 506 aaKnown RBP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TUBP50607 506 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 MAPK10P53779 464 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SLC5A3P53794 718 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 YWHAGP61981 247 aaKnown RBP eCLIP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 EIF2B5Q13144 721 aaKnown RBP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 MTA1Q13330 715 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TRIM14Q14142 442 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 ZNF268Q14587 947 aaPredicted RBP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TCEA2Q15560 299 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 PTPN21Q16825 1174 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 FAM153CQ494X1 144 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SLC44A4Q53GD3 710 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 FAM78AQ5JUQ0 283 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 C10orf120Q5SQS8 335 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SFMBT2Q5VUG0 894 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SNX30Q5VWJ9 437 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TXNDC8Q6A555 127 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TANGO2Q6ICL3 276 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 OR6B2Q6IFH4 312 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 GJB7Q6PEY0 223 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 PARM1Q6UWI2 310 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TOGARAM2Q6ZUX3 1019 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 Q6ZVL8 140 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 PAQR9Q6ZVX9 377 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 ZDHHC17Q8IUH5 632 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 UNC45BQ8IWX7 931 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SUGP1Q8IWZ8 645 aaKnown RBP4.47□□□□□ -1.69
MALAT1-210ENST00000617489 FAM71AQ8IYT1 594 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SYNPOQ8N3V7 929 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 FITM2Q8N6M3 262 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 TOR1AIP2Q8NFQ8 470 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SCAMP5Q8TAC9 235 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 IRGQQ8WZA9 623 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 SHC3Q92529 594 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 FAM149B1Q96BN6 582 aa4.47□□□□□ -1.69
MALAT1-210ENST00000617489 C18orf8Q96DM3 657 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms