RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 FBXO44Q9H4M3 255 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 TLR9Q9NR96 1032 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 EBF1Q9UH73 591 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ZDHHC2Q9UIJ5 367 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 MOXD2PA6NHM9 499 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ERI2A8K979 691 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 TIMM44O43615 452 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 SERPINH1P50454 418 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 RENBPP51606 427 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 KLF10Q13118 480 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ANO4Q32M45 955 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 CLEC6AQ6EIG7 209 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 CACUL1Q86Y37 369 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ATP6V0D2Q8N8Y2 350 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 FBXO22Q8NEZ5 403 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ENTPD7Q9NQZ7 604 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 FAIMQ9NVQ4 179 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 KCNA5P22460 613 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 MS4A2Q01362 244 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 SLC12A1Q13621 1099 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 TRIM71Q2Q1W2 868 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 STEAP4Q687X5 459 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 OGFOD2Q6N063 350 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 WBP2Q969T9 261 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 SORT1Q99523 831 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 TMEM79Q9BSE2 394 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 TTPALQ9BTX7 342 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 POMKQ9H5K3 350 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 TRPM5Q9NZQ8 1165 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 C6orf203Q9P0P8 240 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 C2orf78A6NCI8 922 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 F5H5T6 163 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 H0Y626 953 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 CASQ2O14958 399 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 SNAP91O60641 907 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 CTPS1P17812 591 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 CD151P48509 253 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 DENND5AQ6IQ26 1287 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 XKR5Q6UX68 686 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 RCN3Q96D15 328 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 ILKAPQ9H0C8 392 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 OSBPL2Q9H1P3 480 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 RAB26Q9ULW5 256 aa14.48□□□□□ -0.09
SHROOM1-208ENST00000617339 PPP6CO00743 305 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 AP1G1O43747 822 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 IL1BP01584 269 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 CYP11A1P05108 521 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 GALTP07902 379 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 SLC35E2BP0CK96 405 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PIM1P11309 404 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 FMO4P31512 558 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PPM1FP49593 454 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 CDKN1CP49918 316 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 SGSHP51688 502 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PLIN5Q00G26 463 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 LPCAT1Q8NF37 534 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 HBEGFQ99075 208 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 OLFM1Q99784 485 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 SMG9Q9H0W8 520 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ADA2Q9NZK5 511 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 EPS15L1Q9UBC2 864 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 TPD52L2O43399 206 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 SIX3O95343 332 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 CD97P48960 835 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 SIRPB2Q5JXA9 342 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 BRMS1LQ5PSV4 323 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 IRGQQ8WZA9 623 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 EIF2B3Q9NR50 452 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 RBMX2Q9Y388 322 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 TCAF1Q9Y4C2 921 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 DLX3O60479 287 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 CNTFP26441 200 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ARNTP27540 789 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 RGRP47804 291 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 NDST2P52849 883 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 LRRC73Q5JTD7 316 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PGBD5Q8N414 524 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ZNF784Q8NCA9 323 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ANKRD49Q8WVL7 239 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 MYLIPQ8WY64 445 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 DPF3Q92784 378 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ATP6V1E2Q96A05 226 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 THAP11Q96EK4 314 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 VAT1Q99536 393 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PKMYT1Q99640 499 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ZNF696Q9H7X3 374 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PLGRKTQ9HBL7 147 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 ATP13A1Q9HD20 1204 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 TCF7L2Q9NQB0 619 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 PTGDR2Q9Y5Y4 395 aa14.47□□□□□ -0.09
SHROOM1-208ENST00000617339 G3V2L1 256 aa14.46□□□□□ -0.09
SHROOM1-208ENST00000617339 TFEBP19484 476 aa14.46□□□□□ -0.09
SHROOM1-208ENST00000617339 HCAR3P49019 387 aa14.46□□□□□ -0.09
SHROOM1-208ENST00000617339 RAB10P61026 200 aa14.46□□□□□ -0.09
SHROOM1-208ENST00000617339 C16orf87Q6PH81 154 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms