RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RETSATQ6NUM9 610 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 FAM151BQ6UXP7 276 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 TAS2R42Q7RTR8 314 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GPR78Q96P69 363 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 LRRC37BQ96QE4 947 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 RANBP9Q96S59 729 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 FAM167BQ9BTA0 163 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GPR63Q9BZJ6 419 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 CIPCQ9C0C6 399 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 MTIF3Q9H2K0 278 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 MFSD1Q9H3U5 465 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 CATSPERZQ9NTU4 200 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 STK39Q9UEW8 545 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 G3BP2Q9UN86 482 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 SLC7A4O43246 635 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 CRTAMO95727 393 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 TROVE2P10155 538 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGT1A6P19224 532 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGT1A1P22309 533 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGT1A4P22310 534 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGT1A3P35503 534 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGT1A5P35504 534 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ZNF140P52738 457 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 BCL2L1Q07817 233 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 PEX6Q13608 980 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 FRG1Q14331 258 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 UGP2Q16851 508 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 FBXW10Q5XX13 1052 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 DPY19L3Q6ZPD9 716 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 CPXM2Q8N436 756 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 CCNYL1Q8N7R7 359 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 PIH1D2Q8WWB5 315 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ISL2Q96A47 359 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 VOPP1Q96AW1 172 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 SLC30A3Q99726 388 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ADGRE3Q9BY15 652 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 SARS2Q9NP81 518 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 MKS1Q9NXB0 559 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 HAO1Q9UJM8 370 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GGA2Q9UJY4 613 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 FIS1Q9Y3D6 152 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 C1orf232A0A0U1RR37 186 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 TTC34A8MYJ7 566 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 STX7O15400 261 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 PAPSS2O95340 614 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 LATS1O95835 1130 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ARSAP15289 507 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ITGB6P18564 788 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 HNF1BP35680 557 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 HADHAP40939 763 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 EPHA5P54756 1037 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 NSUN2Q08J23 767 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEK3-207ENST00000617054 TAF1AQ15573 450 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 ZNF77Q15935 545 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ARMC12Q5T9G4 340 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ATG16L1Q676U5 607 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GET4Q7L5D6 327 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 TBC1D1Q86TI0 1168 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 ADIPOR2Q86V24 386 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ZNF781Q8N8C0 355 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 STYXQ8WUJ0 223 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GRAMD1AQ96CP6 724 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 SORT1Q99523 831 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 GATA5Q9BWX5 397 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 ALG9Q9H6U8 611 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 HAUS2Q9NVX0 235 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 NLE1Q9NVX2 485 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 CD84Q9UIB8 345 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 USH1CQ9Y6N9 552 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 TRAFD1O14545 582 aaPredicted RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 DLX3O60479 287 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 SNNO75324 88 aaPredicted RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 UGT2B4P06133 528 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 HNRNPLP14866 589 aaKnown RBP eCLIP7.78□□□□□ -1.162e-21■■□□□ 11.7
NEK3-207ENST00000617054 LPOP22079 712 aaPredicted RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 ZBTB16Q05516 673 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 LRRC8EQ6NSJ5 796 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CRLF3Q8IUI8 442 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CLDN19Q8N6F1 224 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CALML6Q8TD86 181 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 ACDQ96AP0 544 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 MYO19Q96H55 970 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 LMLNQ96KR4 655 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 RILPQ96NA2 401 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 HTATIP2Q9BUP3 242 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 NSMCE4AQ9NXX6 385 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 ZNF510Q9Y2H8 683 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 LAMA1P25391 3075 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 TMEM233B4DJY2 109 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 WASH3PC4AMC7 463 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 H0YHG0 523 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 BIRC5O15392 142 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 ZBTB14O43829 449 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 FZD6O60353 706 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 SIN3BO75182 1162 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 PGLSO95336 258 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 PABPC1P11940 636 aaKnown RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 CD1EP15812 388 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms