RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 STC1P52823 247 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 POLR2LP62875 67 aaKnown RBP12.3□□□□□ -0.44
CBWD1-220ENST00000612045 PEX6Q13608 980 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 TYSND1Q2T9J0 566 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 ITPRIPL2Q3MIP1 535 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 FNDC3BQ53EP0 1204 aaKnown RBP12.3□□□□□ -0.44
CBWD1-220ENST00000612045 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 BRAT1Q6PJG6 821 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 KYAT3Q6YP21 454 aaKnown RBP12.3□□□□□ -0.44
CBWD1-220ENST00000612045 RAPH1Q70E73 1250 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 USP45Q70EL2 814 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 CEP97Q8IW35 865 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 SFTPA1Q8IWL2 248 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 SUSD6Q92537 303 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 ELMO2Q96JJ3 720 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 MCCC1Q96RQ3 725 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-220ENST00000612045 OMDQ99983 421 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 C19orf43Q9BQ61 176 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 IL36AQ9UHA7 158 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 USP15Q9Y4E8 981 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-220ENST00000612045 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
CBWD1-220ENST00000612045 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CTSLP07711 333 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 GSTA1P08263 222 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 STMN1P16949 149 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 DRD4P21917 467 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CRABP2P29373 138 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 SERPINB4P48594 390 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 PGGT1BP53609 377 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 TAS2R39P59534 338 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 RAB10P61026 200 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 XIAPP98170 497 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 IRF9Q00978 393 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 POU4F1Q01851 419 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 ILF2Q12905 390 aaKnown RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 RBM20Q5T481 1227 aaKnown RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 N4BP2L1Q5TBK1 243 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 C16orf46Q6P387 395 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CRTC1Q6UUV9 634 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 RGS9BPQ6ZS82 235 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 TPRG1Q6ZUI0 275 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 TSPAN33Q86UF1 283 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 SCG3Q8WXD2 468 aaKnown RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 LRIG1Q96JA1 1093 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 NDNQ99608 321 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 OSBPL1AQ9BXW6 950 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 INTS10Q9NVR2 710 aaKnown RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CD207Q9UJ71 328 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 TLK1Q9UKI8 766 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 EMCNQ9ULC0 261 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 FNDC3AQ9Y2H6 1198 aaKnown RBP12.29□□□□□ -0.44
CBWD1-220ENST00000612045 CRYL1Q9Y2S2 319 aa12.29□□□□□ -0.44
CBWD1-220ENST00000612045 A8MX80 341 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 PHGDHO43175 533 aaKnown RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 KAT7O95251 611 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 SLC35E2BP0CK96 405 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 CDKN1CP49918 316 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 SLC12A2P55011 1212 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 SEMG2Q02383 582 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 HTR4Q13639 388 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF460Q14592 562 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 TAF1BQ53T94 588 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 HECTD2Q5U5R9 776 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 PIANPQ8IYJ0 282 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 PLD6Q8N2A8 252 aaKnown RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 LRRC8CQ8TDW0 803 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF75CPQ92670 426 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 TCF12Q99081 682 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 OLFM1Q99784 485 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 CORO1CQ9ULV4 474 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-220ENST00000612045 ANKRD6Q9Y2G4 727 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
CBWD1-220ENST00000612045 EDDM13A0A1B0GTR0 161 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 TSPAN11A1L157 253 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 ANHXE9PGG2 379 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 H3BQ06 376 aaPredicted RBP12.27□□□□□ -0.44
CBWD1-220ENST00000612045 PLIN3O60664 434 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 HLA-EP13747 358 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 GRIA2P42262 883 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF234Q14588 700 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 ZRANB3Q5FWF4 1079 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 LRRC73Q5JTD7 316 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 LRRC66Q68CR7 880 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 PSAPL1Q6NUJ1 521 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 HCAR2Q8TDS4 363 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 UCMAQ8WVF2 138 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 FAM161BQ96MY7 647 aa12.27□□□□□ -0.44
CBWD1-220ENST00000612045 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms