RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 SGK2Q9HBY8 427 aa12.04□□□□□ -0.48
CLK4-215ENST00000611733 TREX1Q9NSU2 369 aa12.04□□□□□ -0.48
CLK4-215ENST00000611733 FKBPLQ9UIM3 349 aa12.04□□□□□ -0.48
CLK4-215ENST00000611733 ZCWPW2A0A1B0GU75 182 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 C10orf142B7Z368 130 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 GOLGA8KD6RF30 607 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 GOLGA8TH3BQL2 631 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 RAD51BO15315 384 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 STX7O15400 261 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 LZTS3O60299 673 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 PIAS1O75925 651 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 F7P08709 466 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 ZNF30P17039 623 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 GPX6P59796 221 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 UNC5AQ6ZN44 842 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 TMEM135Q86UB9 458 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 OR2T34Q8NGX1 318 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 PYROXD1Q8WU10 500 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 HDAC10Q969S8 669 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FUBP1Q96AE4 644 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 ZNF669Q96BR6 464 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 TXLNGYQ9BZA5 131 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FAM129AQ9BZQ8 928 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 LRRC4CQ9HCJ2 640 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 NLE1Q9NVX2 485 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 SAMD15Q9P1V8 674 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 ZC3H7BQ9UGR2 993 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 SLCO1B1Q9Y6L6 691 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 RPS6KL1Q9Y6S9 549 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 USP34Q70CQ2 3546 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 PRR33A8MZF0 331 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 H0Y858 1186 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 GAPDHSO14556 408 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 SLC31A1O15431 190 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 HRO43593 1189 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FSBPO95073 299 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 IGHV4-34P06331 123 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 ARNTP27540 789 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 OXTRP30559 389 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 CDKN1CP49918 316 aaPredicted RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 XIAPP98170 497 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 SFSWAPQ12872 951 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 USP39Q53GS9 565 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 TRMT10BQ6PF06 316 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 WDR5BQ86VZ2 330 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 AENQ8WTP8 325 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 STYXQ8WUJ0 223 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 RUBCNQ92622 972 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 CDKN2AIPNLQ96HQ2 116 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 MYOCQ99972 504 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 SLC17A9Q9BYT1 436 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 FOXP3Q9BZS1 431 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 ABCG8Q9H221 673 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 CDC42EP4Q9H3Q1 356 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 FAM96AQ9H5X1 160 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 PREBQ9HCU5 417 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 IL26Q9NPH9 171 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 MBNL1Q9NR56 388 aaKnown RBP12.03□□□□□ -0.48
CLK4-215ENST00000611733 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
CLK4-215ENST00000611733 DOCK9Q9BZ29 2069 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 MAGEB16A2A368 324 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 CCDC162PA2VCL2 907 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 LRRC72A6NJI9 287 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 K7ESM1 405 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 WNT9AO14904 365 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A9O60656 530 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 TM7SF2O76062 418 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 VAPBO95292 243 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 SP9P0CG40 484 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 PGAM1P18669 254 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A6P19224 532 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A1P22309 533 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A4P22310 534 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A3P35503 534 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A5P35504 534 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 RPS21P63220 83 aaKnown RBP12.02□□□□□ -0.48
CLK4-215ENST00000611733 PEX6Q13608 980 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 FAM151BQ6UXP7 276 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 LONP2Q86WA8 852 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 TMEFF1Q8IYR6 380 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 PLA2G15Q8NCC3 412 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UHMK1Q8TAS1 419 aaKnown RBP12.02□□□□□ -0.48
CLK4-215ENST00000611733 BIRC7Q96CA5 298 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 LRRC39Q96DD0 335 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 SRPK1Q96SB4 655 aaKnown RBP12.02□□□□□ -0.48
CLK4-215ENST00000611733 RIOK2Q9BVS4 552 aaKnown RBP12.02□□□□□ -0.48
CLK4-215ENST00000611733 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A7Q9HAW7 530 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A10Q9HAW8 530 aa12.02□□□□□ -0.48
CLK4-215ENST00000611733 UGT1A8Q9HAW9 530 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms