RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC1A1P43005 524 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 BLKP51451 505 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 BCL2L1Q07817 233 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 FGL2Q14314 439 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 TGIF1Q15583 401 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 ODF2Q5BJF6 829 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 PRRT3Q5FWE3 981 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 TMEM164Q5U3C3 297 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 BORAQ6PGQ7 559 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 CLEC18BQ6UXF7 455 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 TMTC1Q8IUR5 882 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 LRRC49Q8IUZ0 686 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 SDR16C5Q8N3Y7 309 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 FSTL5Q8N475 847 aaPredicted RBP19.28■□□□□ 0.68
SGMS1-208ENST00000608287 ARL10Q8N8L6 244 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 CLEC18CQ8NCF0 446 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 HCAR2Q8TDS4 363 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 CXorf40AQ8TE69 158 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 FAF2Q96CS3 445 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 EPN3Q9H201 632 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 PISDQ9UG56 409 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 TFR2Q9UP52 801 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 EPN1Q9Y6I3 576 aaPredicted RBP19.28■□□□□ 0.68
SGMS1-208ENST00000608287 IPO7O95373 1038 aaKnown RBP19.27■□□□□ 0.68
SGMS1-208ENST00000608287 KRT1P04264 644 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 COMTP21964 271 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 HSPA9P38646 679 aaKnown RBP19.27■□□□□ 0.68
SGMS1-208ENST00000608287 AP1S1P61966 158 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 ELP6Q0PNE2 266 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 GALNT2Q10471 571 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 UGP2Q16851 508 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 MARC1Q5VT66 337 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 BRAT1Q6PJG6 821 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 LVRNQ6Q4G3 990 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 RHOT1Q8IXI2 618 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 PQLC3Q8N755 202 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 ASB12Q8WXK4 309 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 CMKLR1Q99788 373 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 C1QTNF2Q9BXJ5 285 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 LOXL2Q9Y4K0 774 aa19.27■□□□□ 0.68
SGMS1-208ENST00000608287 USP9YO00507 2555 aaPredicted RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 TSPAN11A1L157 253 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 TTC24A2A3L6 582 aaPredicted RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 MMP20O60882 483 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 NDUFA10O95299 355 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 ALPIP09923 528 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 FECHP22830 423 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 GARSP41250 739 aaKnown RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 MMP13P45452 471 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 SUOXP51687 545 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 HADHBP55084 474 aaKnown RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 LRRC38Q5VT99 294 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 PHACTR4Q8IZ21 702 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 PGBD5Q8N414 524 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 RNF157Q96PX1 679 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 LRRC4CQ9HCJ2 640 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 PCDH12Q9NPG4 1184 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 AKAP7Q9P0M2 348 aaPredicted RBP19.26■□□□□ 0.67
SGMS1-208ENST00000608287 SCN8AQ9UQD0 1980 aa19.26■□□□□ 0.67
SGMS1-208ENST00000608287 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 RAD51BO15315 384 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 TM7SF2O76062 418 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 ATP1A2P50993 1020 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 PFN3P60673 137 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 MAXP61244 160 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 YPEL5P62699 121 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 GBE1Q04446 702 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 KCNAB2Q13303 367 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 ELOCQ15369 112 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 IFI16Q16666 785 aaKnown RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 TIGD7Q6NT04 549 aaPredicted RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 ERAP2Q6P179 960 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 ZSWIM9Q86XI8 627 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 SPC24Q8NBT2 197 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 PSMG3-AS1Q96PY0 264 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 NUDCD1Q96RS6 583 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 MGME1Q9BQP7 344 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 C1QTNF7Q9BXJ2 289 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 MAK16Q9BXY0 300 aaKnown RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 NT5MQ9NPB1 228 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 DDX56Q9NY93 547 aaKnown RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 KLF15Q9UIH9 416 aa19.25■□□□□ 0.67
SGMS1-208ENST00000608287 SPTBN1Q01082 2364 aaKnown RBP19.25■□□□□ 0.67
SGMS1-208ENST00000608287 A0A0A6YYK5 440 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 C3orf70A6NLC5 250 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ZNF487B1APH4 448 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 PRKCGP05129 697 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 RPLP0P05388 317 aaKnown RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 MX2P20592 715 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 CDC25BP30305 580 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ITKQ08881 620 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 EIF2B5Q13144 721 aaKnown RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 TMEM52BQ4KMG9 183 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 FAXCQ5TGI0 409 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 RAD9BQ6WBX8 426 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 B3GNT8Q7Z7M8 397 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 VASH2Q86V25 355 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 LRRN4Q8WUT4 740 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms