RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 IL10RBQ08334 325 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 ILF3Q12906 894 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 TSR1Q2NL82 804 aaKnown RBP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 TMEM164Q5U3C3 297 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 DCUN1D2Q6PH85 259 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 TSPAN33Q86UF1 283 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 ZNF761Q86XN6 746 aaPredicted RBP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 PAF1Q8N7H5 531 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 ENOX1Q8TC92 643 aaKnown RBP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 SMIM14Q96QK8 99 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 PSKH2Q96QS6 385 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 GSDMCQ9BYG8 508 aa16.81■□□□□ 0.28
CCDC12-210ENST00000604181 PHPT1Q9NRX4 125 aaPredicted RBP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 TRNAU1APQ9NX07 287 aaKnown RBP16.81■□□□□ 0.28
CCDC12-210ENST00000604181 NPIPB15A6NHN6 443 aaPredicted RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 DUX1O43812 170 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 SOD1P00441 154 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 THRAP10827 490 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 VIPR1P32241 457 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 COPB1P53618 953 aaKnown RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 AP1S1P61966 158 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 POLR2LP62875 67 aaKnown RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 TRAF2Q12933 501 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 MAMLD1Q13495 774 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 LBRQ14739 615 aaKnown RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 IGFBP7Q16270 282 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 ACAD10Q6JQN1 1059 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 BORAQ6PGQ7 559 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 DOK6Q6PKX4 331 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 Q6ZVL8 140 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 IL22RA1Q8N6P7 574 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 OR4D9Q8NGE8 314 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 FNIP1Q8TF40 1166 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 SPOCK2Q92563 424 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 SYT11Q9BT88 431 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 NUP62CLQ9H1M0 184 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 AKAP7Q9P0M2 348 aaPredicted RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 SLC17A4Q9Y2C5 497 aa16.8■□□□□ 0.28
CCDC12-210ENST00000604181 PCYT1BQ9Y5K3 369 aaPredicted RBP16.8■□□□□ 0.28
CCDC12-210ENST00000604181 SPTBN1Q01082 2364 aaKnown RBP16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ANKRD62A6NC57 917 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 PDE2AO00408 941 aaPredicted RBP16.79■□□□□ 0.28
CCDC12-210ENST00000604181 EML2O95834 649 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 PSMA2P25787 234 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 GPR3P46089 330 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ATP1A2P50993 1020 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 KCNAB2Q13303 367 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 DPYSQ14117 519 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
CCDC12-210ENST00000604181 PPP6R3Q5H9R7 873 aaPredicted RBP16.79■□□□□ 0.28
CCDC12-210ENST00000604181 FKBP15Q5T1M5 1219 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ERMARDQ5T6L9 678 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 TMCO4Q5TGY1 634 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ANKS6Q68DC2 871 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 TRIM74Q86UV6 250 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 BMPERQ8N8U9 685 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 AGBL5Q8NDL9 886 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 CDH19Q9H159 772 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ADNPQ9H2P0 1102 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 NOD2Q9HC29 1040 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 CWC15Q9P013 229 aaKnown RBP16.79■□□□□ 0.28
CCDC12-210ENST00000604181 ANKMY1Q9P2S6 941 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 SEPT3Q9UH03 358 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 TMEM98Q9Y2Y6 226 aa16.79■□□□□ 0.28
CCDC12-210ENST00000604181 TRBV23OR9-2A0A075B6M9 112 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 GOLGA6BA6NDN3 693 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 EFCAB7A8K855 629 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 TMCO5BA8MYB1 307 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 NKX2-8O15522 239 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 DAPK3O43293 454 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 RAD1O60671 282 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 CPP00450 1065 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 IVLP07476 585 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 MIPP30301 263 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 ACTR1BP42025 376 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 ACTR1AP61163 376 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 MAXP61244 160 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 TRA2AQ13595 282 aaKnown RBP eCLIP16.78■□□□□ 0.281e-7■■□□□ 12.2
CCDC12-210ENST00000604181 CLPPQ16740 277 aaPredicted RBP16.78■□□□□ 0.28
CCDC12-210ENST00000604181 RAET1GQ6H3X3 334 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 TECPR1Q7Z6L1 1165 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 SCARF2Q96GP6 870 aaPredicted RBP16.78■□□□□ 0.28
CCDC12-210ENST00000604181 DDA1Q9BW61 102 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 SPRY4Q9C004 299 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 SLC39A1Q9NY26 324 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 DONSONQ9NYP3 566 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 CD84Q9UIB8 345 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
CCDC12-210ENST00000604181 NOTCH2Q04721 2471 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms