RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TEDDM1Q5T9Z0 273 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 GPR153Q6NV75 609 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 GDPD4Q6W3E5 623 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 CYS1Q717R9 158 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 DENND6AQ8IWF6 608 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 TBATAQ96M53 351 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 BPIFA1Q9NP55 256 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 SSU72Q9NP77 194 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 GEMIN8Q9NWZ8 242 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 ZFATQ9P243 1243 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 TRIM33Q9UPN9 1127 aa17.36■□□□□ 0.37
PPFIA3-207ENST00000602716 A0A1W2PPM1 405 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 UNC5CO95185 931 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 EGFP01133 1207 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 INHBAP08476 426 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 HNF1BP35680 557 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 MPP1Q00013 466 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 FRG1Q14331 258 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 PACS1Q6VY07 963 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 SLC26A11Q86WA9 606 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 PAF1Q8N7H5 531 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 OR4K2Q8NGD2 314 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 MARCH4Q9P2E8 410 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 IL36AQ9UHA7 158 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 CAPN8A6NHC0 703 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 PLK4O00444 970 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 GPR39O43194 453 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 EDF1O60869 148 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 LHCGRP22888 699 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 KIR2DL1P43626 348 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 ACVR1Q04771 509 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 CDKN3Q16667 212 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 FSTL4Q6MZW2 842 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 CACUL1Q86Y37 369 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 SPNS2Q8IVW8 549 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 PLPP6Q8IY26 295 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 AGAP11Q8TF27 550 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 HDAC10Q969S8 669 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 ATXN7L3BQ96GX2 97 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 MYLK2Q9H1R3 596 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 SLCO1B3Q9NPD5 702 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 USH1CQ9Y6N9 552 aa17.35■□□□□ 0.37
PPFIA3-207ENST00000602716 HGSO14964 777 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 TIMM44O43615 452 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 TIE1P35590 1138 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 SLC1A2P43004 574 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 TAF1AQ15573 450 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 PDPK2PQ6A1A2 396 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 LDB1Q86U70 411 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 LRRC8CQ8TDW0 803 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 KLF6Q99612 283 aaPredicted RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 EBF2Q9HAK2 575 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 TXLNGQ9NUQ3 528 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 SLC8A2Q9UPR5 921 aa17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 FNDC3AQ9Y2H6 1198 aaKnown RBP17.34■□□□□ 0.37
PPFIA3-207ENST00000602716 COL6A3P12111 3177 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 EDDM13A0A1B0GTR0 161 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 CCDC162PA2VCL2 907 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 EPHX1P07099 455 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 GABRB3P28472 473 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 RPL26P61254 145 aaKnown RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 RAD51Q06609 339 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 CTBP1Q13363 440 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 SEMA3AQ14563 771 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 HHATQ5VTY9 493 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 ZNF470Q6ECI4 717 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 PARS2Q7L3T8 475 aaKnown RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 PTAR1Q7Z6K3 402 aaPredicted RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 ZNF513Q8N8E2 541 aaPredicted RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 KDM1BQ8NB78 822 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 ACVR1CQ8NER5 493 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 UCMAQ8WVF2 138 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 ZNF641Q96N77 438 aaPredicted RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 FAM129BQ96TA1 746 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 FKBPLQ9UIM3 349 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 RPL26L1Q9UNX3 145 aaKnown RBP17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 STON1Q9Y6Q2 735 aa17.33■□□□□ 0.37
PPFIA3-207ENST00000602716 C1orf232A0A0U1RR37 186 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 GOLGA8CPA6NN73 597 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 A8MUI8 341 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 ZWINTO95229 277 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 CLDN7O95471 211 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 GOT2P00505 430 aaKnown RBP17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 KRT4P19013 534 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 CD72P21854 359 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 SETDB1Q15047 1291 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 ZNF789Q5FWF6 425 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 TLDC1Q6P9B6 456 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 STRA8Q7Z7C7 330 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 GIMAP7Q8NHV1 300 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 ARRDC3Q96B67 414 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 SERAC1Q96JX3 654 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 MAGEE1Q9HCI5 957 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 NLE1Q9NVX2 485 aaPredicted RBP17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 B4GALT6Q9UBX8 382 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 ITM2BQ9Y287 266 aa17.33■□□□□ 0.36
PPFIA3-207ENST00000602716 TSPAN11A1L157 253 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms