RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IVLP07476 585 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 ASIC2Q16515 512 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 LINC00303Q3SY05 128 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 MARC1Q5VT66 337 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 USP45Q70EL2 814 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 HEATR4Q86WZ0 1026 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 NPWQ8N729 165 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 TAAR9Q96RI9 348 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 PEBP4Q96S96 227 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 MGME1Q9BQP7 344 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 FRMD8Q9BZ67 464 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 HAUS4Q9H6D7 363 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 SPATS2LQ9NUQ6 558 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 TAAR2Q9P1P5 351 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 SLC17A4Q9Y2C5 497 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 PRAMEF33A0A0G2JMD5 474 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 STMND1H3BQB6 276 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 PRAMEF10O60809 474 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 ALDH4A1P30038 563 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 CDK3Q00526 305 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 CNGA3Q16281 694 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 ARMC12Q5T9G4 340 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 KCTD16Q68DU8 428 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 ARHGAP36Q6ZRI8 547 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 CYP4V2Q6ZWL3 525 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 POLNQ7Z5Q5 900 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 OR4D9Q8NGE8 314 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 PDCD6IPQ8WUM4 868 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 TEKT4Q8WW24 435 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 EXTL1Q92935 676 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 SCARF2Q96GP6 870 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 MCCC1Q96RQ3 725 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 BPIFA3Q9BQP9 254 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 ASPSCR1Q9BZE9 553 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 CDH19Q9H159 772 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 NOD2Q9HC29 1040 aa17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 RCOR3Q9P2K3 495 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 BZW2Q9Y6E2 419 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-227ENST00000602011 LRRC53A6NM62 1247 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 A8MX80 341 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 MAFKO60675 156 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 PGLSO95336 258 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 MBD3O95983 291 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 PEX11BO96011 259 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF30P17039 623 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 ITIH1P19827 911 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 CSRP3P50461 194 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 ATP1A2P50993 1020 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 LIMK2P53671 638 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 MAPK10P53779 464 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 GPLD1P80108 840 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 KLHL30Q0D2K2 578 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 LRP8Q14114 963 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF765Q7L2R6 523 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 NRROSQ86YC3 692 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 AGBL5Q8NDL9 886 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 CCL4L1Q8NHW4 92 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 ISCUQ9H1K1 167 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 HSD3B7Q9H2F3 369 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 SEMA6CQ9H3T2 930 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 STARD5Q9NSY2 213 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 SUFUQ9UMX1 484 aa17.78■□□□□ 0.44
SHKBP1-227ENST00000602011 C9orf172C9J069 976 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 CAPN5O15484 640 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 ECEL1O95672 775 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 CD1CP29017 333 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 MMP13P45452 471 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 GPR1P46091 355 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 GNPDA1P46926 289 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 OR1D5P58170 312 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 AMZ1Q400G9 498 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 CCDC183Q5T5S1 534 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 RAET1GQ6H3X3 334 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 ADAMTSL4Q6UY14 1074 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF571Q7Z3V5 609 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 TECPR1Q7Z6L1 1165 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 SFTPA2Q8IWL1 248 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 NRSN1Q8IZ57 195 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 ATPAF2Q8N5M1 289 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF653Q96CK0 615 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 CSPG4P5Q96PW8 444 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 PCDHGA4Q9Y5G9 962 aa17.77■□□□□ 0.44
SHKBP1-227ENST00000602011 BSNQ9UPA5 3926 aa17.77■□□□□ 0.43
SHKBP1-227ENST00000602011 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 CA4P22748 312 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 AMPD1P23109 780 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 CSTF2P33240 577 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 ADCY8P40145 1251 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 ETV5P41161 510 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 ETV3P41162 512 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 RAB15P59190 212 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 CTBSQ01459 385 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 C16orf72Q14CZ0 275 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 ATG14Q6ZNE5 492 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 Q6ZVL8 140 aa17.76■□□□□ 0.43
SHKBP1-227ENST00000602011 HSD11B1LQ7Z5J1 315 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms