RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 PTPRZ1P23471 2315 aaPredicted RBP19.32■□□□□ 0.68
UPF1-209ENST00000600310 OTOGLQ3ZCN5 2332 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 TLR4O00206 839 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 TOR1BO14657 336 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 MAGEC1O60732 1142 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 SYPP08247 313 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 HMGCLP35914 325 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 MAGEA6P43360 314 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 RABIFP47224 123 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 C21orf59P57076 290 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 CDK16Q00536 496 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 BNC1Q01954 994 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 DPTQ07507 201 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 PTK6Q13882 451 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 SF3A2Q15428 464 aaKnown RBP19.31■□□□□ 0.68
UPF1-209ENST00000600310 WHAMMP3Q1A5X7 153 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ESRP1Q6NXG1 681 aaKnown RBP19.31■□□□□ 0.68
UPF1-209ENST00000600310 Q6ZSR6 202 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ZNF765Q7L2R6 523 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 OR52K1Q8NGK4 314 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 BRSK1Q8TDC3 778 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ZDHHC5Q9C0B5 715 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ABCG8Q9H221 673 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 CASS4Q9NQ75 786 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 GPR27Q9NS67 375 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ANKRD6Q9Y2G4 727 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 DOCK9Q9BZ29 2069 aa19.31■□□□□ 0.68
UPF1-209ENST00000600310 ARHGAP33O14559 1287 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 PCCBP05166 539 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 THEGLP0DJG4 465 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 TPSB2P20231 275 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 NXPH1P58417 271 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 DR1Q01658 176 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 GRIK2Q13002 908 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 MTM1Q13496 603 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 TAF1AQ15573 450 aaPredicted RBP19.3■□□□□ 0.68
UPF1-209ENST00000600310 TPSAB1Q15661 275 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 KIF19Q2TAC6 998 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 PNCKQ6P2M8 343 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 PPP1R21Q6ZMI0 780 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 PRR23CQ6ZRP0 262 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 GLT6D1Q7Z4J2 308 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 OR13H1Q8NG92 308 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 KRT12Q99456 494 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 CDH19Q9H159 772 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 FSCN3Q9NQT6 498 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 RAD18Q9NS91 495 aa19.3■□□□□ 0.68
UPF1-209ENST00000600310 RIF1Q5UIP0 2472 aaKnown RBP19.29■□□□□ 0.68
UPF1-209ENST00000600310 PLXNA2O75051 1894 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 LNP1A1A4G5 178 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 SLC4A1P02730 911 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 ENGP17813 658 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 TEAD1P28347 426 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 GRIA1P42261 906 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 CTSKP43235 329 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 DCDC1P59894 354 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 YPEL5P62699 121 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 C2orf54Q08AI8 447 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 CDH17Q12864 832 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 DHX34Q14147 1143 aaKnown RBP19.29■□□□□ 0.68
UPF1-209ENST00000600310 INPP5AQ14642 412 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 KCNJ11Q14654 390 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 IL27RAQ6UWB1 636 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 KDM7AQ6ZMT4 941 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 PTAR1Q7Z6K3 402 aaPredicted RBP19.29■□□□□ 0.68
UPF1-209ENST00000600310 JAMLQ86YT9 394 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 DCP2Q8IU60 420 aaKnown RBP19.29■□□□□ 0.68
UPF1-209ENST00000600310 PELI3Q8N2H9 469 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 PLA2G15Q8NCC3 412 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 CPT1BQ92523 772 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 SCAMP4Q969E2 229 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 AP2M1Q96CW1 435 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 FAM83DQ9H4H8 585 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 IL17CQ9P0M4 197 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 NFKBIL1Q9UBC1 381 aaPredicted RBP19.29■□□□□ 0.68
UPF1-209ENST00000600310 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 CD84Q9UIB8 345 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 SNX11Q9Y5W9 270 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 MRFAP1Q9Y605 127 aa19.29■□□□□ 0.68
UPF1-209ENST00000600310 TCRBV7S3A2A0A539 114 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 C2orf81A6NN90 581 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 K7ESM1 405 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 CRTAMO95727 393 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 TSHRP16473 764 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 BPIP17213 487 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 TPH1P17752 444 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 TRIM23P36406 574 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 ADCY8P40145 1251 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 HENMT1Q5T8I9 393 aaKnown RBP19.28■□□□□ 0.68
UPF1-209ENST00000600310 SPATS2Q86XZ4 545 aaKnown RBP19.28■□□□□ 0.68
UPF1-209ENST00000600310 DNAAF3Q8N9W5 541 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 GPR26Q8NDV2 337 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 C19orf43Q9BQ61 176 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 APOOQ9BUR5 198 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 RIOK2Q9BVS4 552 aaKnown RBP19.28■□□□□ 0.68
UPF1-209ENST00000600310 GDF3Q9NR23 364 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 PIH1D1Q9NWS0 290 aaKnown RBP19.28■□□□□ 0.68
UPF1-209ENST00000600310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.28■□□□□ 0.68
UPF1-209ENST00000600310 ARL5AQ9Y689 179 aa19.28■□□□□ 0.68
UPF1-209ENST00000600310 LRRK1Q38SD2 2015 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms