RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TLE3Q04726 772 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CCDC173Q0VFZ6 552 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 EIF3IQ13347 325 aaKnown RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 PEX6Q13608 980 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 TCEA2Q15560 299 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 C14orf28Q4W4Y0 310 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 ZNF765Q7L2R6 523 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CPNE8Q86YQ8 564 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 RHOT2Q8IXI1 618 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 ARL14Q8N4G2 192 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 SLC35G2Q8TBE7 412 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 KIAA1524Q8TCG1 905 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CCDC97Q96F63 343 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 CRELD1Q96HD1 420 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 PRR11Q96HE9 360 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 CCDC42Q96M95 316 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 RNF157Q96PX1 679 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 UBL7Q96S82 380 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 GSDMCQ9BYG8 508 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 FRMD8Q9BZ67 464 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 LRRN3Q9H3W5 708 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 DPEP2Q9H4A9 486 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 CARS2Q9HA77 564 aaKnown RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 RABGEF1Q9UJ41 708 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 MOSPD1Q9UJG1 213 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
VRK3-221ENST00000600284 COL27A1Q8IZC6 1860 aaPredicted RBP15.78■□□□□ 0.12
VRK3-221ENST00000600284 A0A1W2PNU3 283 aaPredicted RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 A0A1W2PQM1 296 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 MTA2O94776 668 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 RPLP0P05388 317 aaKnown RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 IVLP07476 585 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 CTPS1P17812 591 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 EPHB1P54762 984 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 UCNP55089 124 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 CCL7P80098 99 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 DSC2Q02487 901 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 PTSQ03393 145 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 GBE1Q04446 702 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 ILF3Q12906 894 aaKnown RBP eCLIP15.77■□□□□ 0.12
VRK3-221ENST00000600284 SLC10A2Q12908 348 aaPredicted RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 HLTFQ14527 1009 aaKnown RBP eCLIP15.77■□□□□ 0.12
VRK3-221ENST00000600284 MESDQ14696 234 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 CERCAMQ5T4B2 595 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 ZFYVE27Q5T4F4 411 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 BROXQ5VW32 411 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 LRRC66Q68CR7 880 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 RAET1GQ6H3X3 334 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 ADAMTSL4Q6UY14 1074 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 TSPAN33Q86UF1 283 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 CCDC13Q8IYE1 715 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 ARRDC2Q8TBH0 407 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 RAPGEF5Q92565 580 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 SCARF2Q96GP6 870 aaPredicted RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 ZNF830Q96NB3 372 aaPredicted RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 TMEM74Q96NL1 305 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 LYSMD1Q96S90 227 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 TDRD1Q9BXT4 1180 aaKnown RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 TSPY26PQ9H489 355 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 NHEJ1Q9H9Q4 299 aaPredicted RBP15.77■□□□□ 0.12
VRK3-221ENST00000600284 DTLQ9NZJ0 730 aa15.77■□□□□ 0.12
VRK3-221ENST00000600284 CAPN8A6NHC0 703 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CDRT15L2A8MXV6 281 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 D6RAR5 112 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 ZW10O43264 779 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 MFAP3LO75121 409 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 PRLP01236 227 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 FUCA1P04066 466 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CCKBRP32239 447 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 GPR1P46091 355 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 SKOR1P84550 965 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 PPIDQ08752 370 aaKnown RBP15.76■□□□□ 0.11
VRK3-221ENST00000600284 LRRC38Q5VT99 294 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 GPR155Q7Z3F1 870 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CLEC14AQ86T13 490 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
VRK3-221ENST00000600284 NRROSQ86YC3 692 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CCNJLQ8IV13 435 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 NRSN1Q8IZ57 195 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 LSM14AQ8ND56 463 aaKnown RBP15.76■□□□□ 0.11
VRK3-221ENST00000600284 CCNYQ8ND76 341 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CCL4L1Q8NHW4 92 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 KCNE4Q8WWG9 221 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 AP2M1Q96CW1 435 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 FCRL3Q96P31 734 aaPredicted RBP15.76■□□□□ 0.11
VRK3-221ENST00000600284 CHP1Q99653 195 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 ANP32EQ9BTT0 268 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 ABCG8Q9H221 673 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 SYNDIG1Q9H7V2 258 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 LRIT1Q9P2V4 623 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 INTUQ9ULD6 942 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 CHKBQ9Y259 395 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 SHROOM3Q8TF72 1996 aa15.76■□□□□ 0.11
VRK3-221ENST00000600284 TEX51A0A1B0GUA7 166 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 LRRD1A4D1F6 860 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 GOLGA6CA6NDK9 693 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 GOLGA6BA6NDN3 693 aa15.75■□□□□ 0.11
VRK3-221ENST00000600284 TK2O00142 265 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms