RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 NLRP9Q7RTR0 991 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 IGDCC3Q8IVU1 814 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 NRSN1Q8IZ57 195 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PPHLN1Q8NEY8 458 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 OR13C4Q8NGS5 318 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 IFT81Q8WYA0 676 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 UBXN4Q92575 508 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 FOXJ1Q92949 421 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 ZNF778Q96MU6 729 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 LENG8Q96PV6 779 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 KLF6Q99612 283 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PRRX2Q99811 253 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 CDH19Q9H159 772 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PKD2L2Q9NZM6 624 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 COQ6Q9Y2Z9 468 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 TEX264Q9Y6I9 313 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 NUMA1Q14980 2115 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 FAM237BA0A1B0GVD1 139 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 H7C0S8 307 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 RAD51BO15315 384 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 STX7O15400 261 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 MAP3K13O43283 966 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 BANF1O75531 89 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 FSBPO95073 299 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 PAK4O96013 591 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 SLC4A1P02730 911 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DCDC1P59894 354 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DPTQ07507 201 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 SEPT6Q14141 434 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 WSCD2Q2TBF2 565 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 BBS9Q3SYG4 887 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 CENPUQ71F23 418 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 LPCAT2Q7L5N7 544 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 TMEM135Q86UB9 458 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 TP53I13Q8NBR0 393 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 TMEM145Q8NBT3 493 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 GPR26Q8NDV2 337 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DENND6BQ8NEG7 585 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 OR4K2Q8NGD2 314 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 KLK6Q92876 244 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 CENPTQ96BT3 561 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DNAJC1Q96KC8 554 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 PLAC1Q9HBJ0 212 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 CHRAC1Q9NRG0 131 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 KCTD5Q9NXV2 234 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 DMTF1Q9Y222 760 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 PKP3Q9Y446 797 aa12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 V9GYY5 206 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-206ENST00000600118 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 A0A1W2PPC4 97 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 GAPDHSO14556 408 aaPredicted RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SLC31A1O15431 190 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 CD27P26842 260 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 NMBRP28336 390 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SPAM1P38567 509 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 ELK3P41970 407 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 PTGER3P43115 390 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 ARSDP51689 593 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 PTPN5P54829 565 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 XIAPP98170 497 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SGCGQ13326 291 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SKIDA1Q1XH10 827 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SETMARQ53H47 684 aaPredicted RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 ZDHHC20Q5W0Z9 365 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 ESRP1Q6NXG1 681 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 TMEFF1Q8IYR6 380 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 C1orf216Q8TAB5 229 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 SCAMP4Q969E2 229 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 NUS1Q96E22 293 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 HSPA12BQ96MM6 686 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 FMO2Q99518 471 aa12.61□□□□□ -0.39
CHMP2A-206ENST00000600118 TRIM56Q9BRZ2 755 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms