RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KCTD5Q9NXV2 234 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 IMPACTQ9P2X3 320 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 PHTF1Q9UMS5 762 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 PCDHA13Q9Y5I0 950 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 CFAP46Q8IYW2 2715 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 SCN8AQ9UQD0 1980 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 GOLGA6CA6NDK9 693 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 GOLGA6BA6NDN3 693 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 RCCD1A6NED2 376 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 MYO1FO00160 1098 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 PLD2O14939 933 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 HEXIM1O94992 359 aaKnown RBP18.73■□□□□ 0.59
PNKP-213ENST00000599543 NDUFA10O95299 355 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 GOLGA6DP0CG33 693 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 ETV3P41162 512 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 INHBCP55103 352 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 C19orf57Q0VDD7 668 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 TRAF2Q12933 501 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 ARHGEF7Q14155 803 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 CERCAMQ5T4B2 595 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 ARMC12Q5T9G4 340 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 USP45Q70EL2 814 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 HEATR4Q86WZ0 1026 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 TMTC1Q8IUR5 882 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 CCNJLQ8IV13 435 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 CCDC170Q8IYT3 715 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 PELI3Q8N2H9 469 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 Q8N9G6 341 aaPredicted RBP18.73■□□□□ 0.59
PNKP-213ENST00000599543 TMEM74Q96NL1 305 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 DESI2Q9BSY9 194 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 LRRN3Q9H3W5 708 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 GOLGA6AQ9NYA3 693 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 RCOR3Q9P2K3 495 aaPredicted RBP18.73■□□□□ 0.59
PNKP-213ENST00000599543 UVRAGQ9P2Y5 699 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 APPL1Q9UKG1 709 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
PNKP-213ENST00000599543 HYOU1Q9Y4L1 999 aa18.73■□□□□ 0.59
PNKP-213ENST00000599543 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
PNKP-213ENST00000599543 A0A1W2PQM1 296 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 ERVH48-1M5A8F1 160 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 PSMD11O00231 422 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 PROSCO94903 275 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 PGLSO95336 258 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 KRT10P13645 584 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 TAS2R40P59535 323 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 SKOR1P84550 965 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 SPA17Q15506 151 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 HADHQ16836 314 aaKnown RBP18.72■□□□□ 0.59
PNKP-213ENST00000599543 ATP13A4Q4VNC1 1196 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 C14orf28Q4W4Y0 310 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 OGFOD3Q6PK18 319 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 RAB11FIP2Q7L804 512 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 CLEC14AQ86T13 490 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 LRRC49Q8IUZ0 686 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 FBXO39Q8N4B4 442 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 DTD2Q96FN9 168 aa18.72■□□□□ 0.59
PNKP-213ENST00000599543 SUDS3Q9H7L9 328 aaPredicted RBP18.72■□□□□ 0.59
PNKP-213ENST00000599543 CARS2Q9HA77 564 aaKnown RBP18.72■□□□□ 0.59
PNKP-213ENST00000599543 ZFC3H1O60293 1989 aaKnown RBP18.72■□□□□ 0.59
PNKP-213ENST00000599543 A0A0U1RQJ8 604 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 NPIPB15A6NHN6 443 aaPredicted RBP18.71■□□□□ 0.59
PNKP-213ENST00000599543 NOBOXO60393 691 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 LCA5LO95447 670 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 PNLIPP16233 465 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 LHCGRP22888 699 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 CCKBRP32239 447 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 RHDQ02161 417 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 ITKQ08881 620 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 VAC14Q08AM6 782 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 ILF3Q12906 894 aaKnown RBP eCLIP18.71■□□□□ 0.59
PNKP-213ENST00000599543 TAF1BQ53T94 588 aaPredicted RBP18.71■□□□□ 0.59
PNKP-213ENST00000599543 RAET1GQ6H3X3 334 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 HSD11B1LQ7Z5J1 315 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 SPRED1Q7Z699 444 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 NDUFAF2Q8N183 169 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 CCL4L1Q8NHW4 92 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 SCRN2Q96FV2 425 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 MCCC1Q96RQ3 725 aaPredicted RBP18.71■□□□□ 0.59
PNKP-213ENST00000599543 TEX101Q9BY14 249 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
PNKP-213ENST00000599543 GOLPH3Q9H4A6 298 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 NT5MQ9NPB1 228 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.71■□□□□ 0.59
PNKP-213ENST00000599543 LRIT1Q9P2V4 623 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 RNF215Q9Y6U7 377 aa18.71■□□□□ 0.59
PNKP-213ENST00000599543 COL6A6A6NMZ7 2263 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 NUDT21O43809 227 aaKnown RBP18.7■□□□□ 0.58
PNKP-213ENST00000599543 MFSD11O43934 449 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 TNNT1P13805 278 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 UGT1A5P35504 534 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 NOP2P46087 812 aaKnown RBP18.7■□□□□ 0.58
PNKP-213ENST00000599543 CDK3Q00526 305 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 MMRN1Q13201 1228 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 HLTFQ14527 1009 aaKnown RBP eCLIP18.7■□□□□ 0.58
PNKP-213ENST00000599543 JAMLQ86YT9 394 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 SFTPA2Q8IWL1 248 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 SEMA3CQ99985 751 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 GSDMCQ9BYG8 508 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 HAUS2Q9NVX0 235 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms