RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 TRAF2Q12933 501 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 ENPP2Q13822 863 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 FRG1Q14331 258 aaKnown RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 PUM1Q14671 1186 aaKnown RBP eCLIP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 EFTUD2Q15029 972 aaKnown RBP eCLIP8.17□□□□□ -1.19e-21■■■■■ 84.4
GRAMD1A-210ENST00000599476 TAF1AQ15573 450 aaPredicted RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 UBAP2Q5T6F2 1119 aaKnown RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TSTD2Q5T7W7 516 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 EGFLAMQ63HQ2 1017 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TMEM215Q68D42 235 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 MRNIPQ6NTE8 343 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 BRAT1Q6PJG6 821 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 GDPD4Q6W3E5 623 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 DPY19L3Q6ZPD9 716 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 CYS1Q717R9 158 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SDCCAG8Q86SQ7 713 aaPredicted RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TMEM135Q86UB9 458 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 CAMK1DQ8IU85 385 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 LURAP1LQ8IV03 231 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 KDM1BQ8NB78 822 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SLC44A1Q8WWI5 657 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 PTPRN2Q92932 1015 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 ARL8AQ96BM9 186 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 MTBPQ96DY7 904 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 PPP1R16AQ96I34 528 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 LRIG1Q96JA1 1093 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 TRIB3Q96RU7 358 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SMC6Q96SB8 1091 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 CPNE1Q99829 537 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 GABRG3Q99928 467 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 WDR83Q9BRX9 315 aaKnown RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 IQCGQ9H095 443 aaKnown RBP8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SUV39H2Q9H5I1 410 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 KCNK9Q9NPC2 374 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 SUN2Q9UH99 717 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 IL36AQ9UHA7 158 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 LGALS13Q9UHV8 139 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 PHTF1Q9UMS5 762 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 ATG2BQ96BY7 2078 aa8.17□□□□□ -1.1
GRAMD1A-210ENST00000599476 C1orf232A0A0U1RR37 186 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 C1QTNF3-AMACRE9PGA6 284 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 KPNA3O00505 521 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 HRO43593 1189 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 RPP40O75818 363 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 SYF2O95926 243 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 LMNAP02545 664 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 PYGBP11216 843 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 CYP2A6P11509 494 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 HOXB2P14652 356 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 CTPS1P17812 591 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 NR1D1P20393 614 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 LPOP22079 712 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 SPRP35270 261 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 PPARGP37231 505 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 GP5P40197 560 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 HADHAP40939 763 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 SLC12A2P55011 1212 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 ARHGEF7Q14155 803 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 STARD3Q14849 445 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 RASA2Q15283 850 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 SMAD1Q15797 465 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 CNGA3Q16281 694 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 QPCTQ16769 361 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 USP39Q53GS9 565 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 TTMPQ5BVD1 217 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 AARS2Q5JTZ9 985 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 ZNF470Q6ECI4 717 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 KIAA0930Q6ICG6 404 aaPredicted RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 NEPROQ6NW34 567 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 ERAP2Q6P179 960 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 AFTPHQ6ULP2 937 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 MARK2Q7KZI7 788 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 STRA8Q7Z7C7 330 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 C11orf74Q86VG3 221 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 SRRM1Q8IYB3 904 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 AGGF1Q8N302 714 aaeCLIP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 OR2A12Q8NGT7 310 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 STYXQ8WUJ0 223 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 PEX13Q92968 403 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 MFSD3Q96ES6 412 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 TSNARE1Q96NA8 513 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 HHIPQ96QV1 700 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 TTC1Q99614 292 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 CNOT10Q9H9A5 744 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 MAGEE1Q9HCI5 957 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 IARS2Q9NSE4 1012 aaKnown RBP8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 NKIRAS1Q9NYS0 192 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 MOCS1Q9NZB8 636 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 ZNF180Q9UJW8 692 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
GRAMD1A-210ENST00000599476 FNDC3AQ9Y2H6 1198 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms