RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SLITRK4Q8IW52 837 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 NIPA2Q8N8Q9 360 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 HSPH1Q92598 858 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 CSPG4P5Q96PW8 444 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 MCCC1Q96RQ3 725 aaPredicted RBP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 FRMD8Q9BZ67 464 aaPredicted RBP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 POLR1EQ9GZS1 481 aaKnown RBP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 ZMYND15Q9H091 742 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 ISCUQ9H1K1 167 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 HSD3B7Q9H2F3 369 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 STN1Q9H668 368 aaKnown RBP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 TAAR2Q9P1P5 351 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 IP6K2Q9UHH9 426 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 AMACRQ9UHK6 382 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 LCMT1Q9UIC8 334 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
HOMER3-210ENST00000599097 ASH1LQ9NR48 2969 aaKnown RBP17.44■□□□□ 0.38
HOMER3-210ENST00000599097 UNC13CQ8NB66 2214 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 PMS2P1A4D2B8 440 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 A8MX80 341 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 STMND1H3BQB6 276 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 MAFKO60675 156 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 PGLSO95336 258 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 CR2P20023 1033 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 GPR1P46091 355 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 GNPDA1P46926 289 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 MAPK10P53779 464 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 EPHB1P54762 984 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 KRT81Q14533 505 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 FIGNQ5HY92 759 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 KIAA1614Q5VZ46 1190 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 DENND2CQ68D51 928 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 ZNF765Q7L2R6 523 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 LGR4Q9BXB1 951 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 FAM117AQ9C073 453 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 SLC17A4Q9Y2C5 497 aa17.43■□□□□ 0.38
HOMER3-210ENST00000599097 SETXQ7Z333 2677 aaKnown RBP17.43■□□□□ 0.38
HOMER3-210ENST00000599097 PRAMEF33A0A0G2JMD5 474 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.42■□□□□ 0.38
HOMER3-210ENST00000599097 DDX3XO00571 662 aaKnown RBP eCLIP17.42■□□□□ 0.38
HOMER3-210ENST00000599097 PRAMEF10O60809 474 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 SERPINC1P01008 464 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 CEACAM5P06731 702 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 HGFP14210 728 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 MAN1A1P33908 653 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 ETV3P41162 512 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 GPLD1P80108 840 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 SMTNL2Q2TAL5 461 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 AMZ1Q400G9 498 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 CCDC122Q5T0U0 273 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 C17orf82Q86X59 251 aaPredicted RBP17.42■□□□□ 0.38
HOMER3-210ENST00000599097 AVL9Q8NBF6 648 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
HOMER3-210ENST00000599097 OR2M4Q96R27 311 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 SUFUQ9UMX1 484 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 PPIL1Q9Y3C6 166 aa17.42■□□□□ 0.38
HOMER3-210ENST00000599097 A0A1B0GTH6 734 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 EFSO43281 561 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 SLC2A4P14672 509 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 GM2AP17900 193 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 AMPD1P23109 780 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 CSTF2P33240 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
HOMER3-210ENST00000599097 ZNF165P49910 485 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 B4GALNT1Q00973 533 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 SLC30A9Q6PML9 568 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 ADAMTSL4Q6UY14 1074 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 NLRP8Q86W28 1048 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 MAP7D3Q8IWC1 876 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 AGBL5Q8NDL9 886 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 OR4D9Q8NGE8 314 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 USP7Q93009 1102 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 TAAR9Q96RI9 348 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 ASPSCR1Q9BZE9 553 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 TRIM7Q9C029 511 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 SUDS3Q9H7L9 328 aaPredicted RBP17.41■□□□□ 0.38
HOMER3-210ENST00000599097 ANAPC7Q9UJX3 599 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 PIEZO2Q9H5I5 2752 aa17.41■□□□□ 0.38
HOMER3-210ENST00000599097 SPTA1P02549 2419 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 A0A1W2PQJ5 194 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 NPIPB15A6NHN6 443 aaPredicted RBP17.4■□□□□ 0.38
HOMER3-210ENST00000599097 MYO1FO00160 1098 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 SLC28A2O43868 658 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 PEX11BO96011 259 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 FGF1P05230 155 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 RARAP10276 462 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 ITIH1P19827 911 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 ACTR1BP42025 376 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 NOP2P46087 812 aaKnown RBP17.4■□□□□ 0.38
HOMER3-210ENST00000599097 MAZP56270 477 aaKnown RBP17.4■□□□□ 0.38
HOMER3-210ENST00000599097 RAB15P59190 212 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 ACTR1AP61163 376 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 RPL26P61254 145 aaKnown RBP17.4■□□□□ 0.38
HOMER3-210ENST00000599097 ITKQ08881 620 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 TRAF2Q12933 501 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 SQSTM1Q13501 440 aa17.4■□□□□ 0.38
HOMER3-210ENST00000599097 KCTD16Q68DU8 428 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms