RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 LMLNQ96KR4 655 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 DRC3Q9H069 523 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 LMCD1Q9NZU5 365 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 KIAA1522Q9P206 1035 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 EVLQ9UI08 416 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FKBPLQ9UIM3 349 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 MTCL1Q9Y4B5 1905 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 CAPN14A8MX76 684 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 PTPN2P17706 415 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 PFKLP17858 780 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 KCNA5P22460 613 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 MPSTP25325 297 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 PMLP29590 882 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 HNRNPH1P31943 449 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 CTSOP43234 321 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 ALDH18A1P54886 795 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 ADGRE1Q14246 886 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 KRT72Q14CN4 511 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 AFTPHQ6ULP2 937 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 TMEM25Q86YD3 366 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 LSMEM2Q8N112 164 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 INPP5DQ92835 1189 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 EID2BQ96D98 161 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 CDH19Q9H159 772 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 LNPEPQ9UIQ6 1025 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 STK38LQ9Y2H1 464 aa17.03■□□□□ 0.32
SHKBP1-216ENST00000598201 TRAFD1O14545 582 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 MGRN1O60291 552 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 PIGNO95427 931 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 ALPIP09923 528 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 CTPS1P17812 591 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 AP1S1P61966 158 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 RCN2Q14257 317 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 PIANPQ8IYJ0 282 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 PIH1D2Q8WWB5 315 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 RPL10LQ96L21 214 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 GAS2L1Q99501 681 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 TNKS2Q9H2K2 1166 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 FAM96AQ9H5X1 160 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 ABCB8Q9NUT2 735 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 DNAJC28Q9NX36 388 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 FNDC3AQ9Y2H6 1198 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 HCFC2Q9Y5Z7 792 aa17.02■□□□□ 0.32
SHKBP1-216ENST00000598201 MYOFQ9NZM1 2061 aa17.02■□□□□ 0.31
SHKBP1-216ENST00000598201 NOTCH4Q99466 2003 aa17.02■□□□□ 0.31
SHKBP1-216ENST00000598201 A8MUI8 341 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PGLSO95336 258 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 IGFBP4P22692 258 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 HLA-FP30511 346 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 KCNC1P48547 511 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 STK19P49842 368 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 KPNA2P52292 529 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PRKAA2P54646 552 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PFKPQ01813 784 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 UBAP2LQ14157 1087 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 RALGPS1Q5JS13 557 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 DGKKQ5KSL6 1271 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ASTLQ6HA08 431 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PSAPL1Q6NUJ1 521 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MAPK15Q8TD08 544 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 SCG3Q8WXD2 468 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 LPGAT1Q92604 370 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MYO19Q96H55 970 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 AARSD1Q9BTE6 412 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 CCDC106Q9BWC9 280 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 TBC1D10AQ9BXI6 508 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 STN1Q9H668 368 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 HELZP42694 1942 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 UBA6A0AVT1 1052 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 SERPINA6P08185 405 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PTPN4P29074 926 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MC4RP32245 332 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 EPHB1P54762 984 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PEX6Q13608 980 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ACAP2Q15057 778 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PITRM1Q5JRX3 1037 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ARMC12Q5T9G4 340 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ADGRD2Q7Z7M1 963 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 RBM23Q86U06 439 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 CCNYL1Q8N7R7 359 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MIPEPQ99797 713 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ILKAPQ9H0C8 392 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 COG4Q9H9E3 785 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 INTS10Q9NVR2 710 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 CORO1CQ9ULV4 474 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MED16Q9Y2X0 877 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 ZNF711Q9Y462 761 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 MTCH2Q9Y6C9 303 aa17.01■□□□□ 0.31
SHKBP1-216ENST00000598201 PER2O15055 1255 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 STX7O15400 261 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms