RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SNF8Q96H20 258 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 SERAC1Q96JX3 654 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 ZNF778Q96MU6 729 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 PCED1AQ9H1Q7 454 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 SYBUQ9NX95 663 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 SLC2A6Q9UGQ3 507 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 ANAPC5Q9UJX4 755 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 SCN8AQ9UQD0 1980 aa15.49■□□□□ 0.07
SMCO4-206ENST00000596676 PATE3B3GLJ2 98 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 BHMG1C9JSJ3 638 aaPredicted RBP15.48■□□□□ 0.07
SMCO4-206ENST00000596676 BPIP17213 487 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 SPINT3P49223 89 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 GUCY2DQ02846 1103 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 IRF4Q15306 451 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 SETMARQ53H47 684 aaPredicted RBP15.48■□□□□ 0.07
SMCO4-206ENST00000596676 CES3Q6UWW8 571 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 GCNT7Q6ZNI0 430 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 C11orf74Q86VG3 221 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 MCUQ8NE86 351 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 OR4K2Q8NGD2 314 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 CCHCR1Q8TD31 782 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 BRSK1Q8TDC3 778 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 NUS1Q96E22 293 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 BMFQ96LC9 184 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 SERPINB12Q96P63 405 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 RIOK2Q9BVS4 552 aaKnown RBP15.48■□□□□ 0.07
SMCO4-206ENST00000596676 ARRDC1-AS1Q9H2J1 176 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 TM9SF3Q9HD45 589 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMCO4-206ENST00000596676 IL17CQ9P0M4 197 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 HCN4Q9Y3Q4 1203 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 USP34Q70CQ2 3546 aa15.48■□□□□ 0.07
SMCO4-206ENST00000596676 GPR39O43194 453 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 RHOXF2BP0C7M4 288 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 ZNF30P17039 623 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 HNRNPA2B1P22626 353 aaKnown RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 NFKBIAP25963 317 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 NBL1P41271 181 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 CDK16Q00536 496 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 LRRC14Q15048 493 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 TAF1AQ15573 450 aaPredicted RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 WDR45BQ5MNZ6 344 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 HP1BP3Q5SSJ5 553 aaPredicted RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 TPRG1LQ5T0D9 272 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 ZDHHC24Q6UX98 284 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 CYP2U1Q7Z449 544 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 PNPLA1Q8N8W4 532 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 DNAJC1Q96KC8 554 aaKnown RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 RHOXF2Q9BQY4 288 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 KCNH6Q9H252 994 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 EPB41L5Q9HCM4 733 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 CHRAC1Q9NRG0 131 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 AASDHPPTQ9NRN7 309 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 HACD3Q9P035 362 aa15.47■□□□□ 0.07
SMCO4-206ENST00000596676 UTP11Q9Y3A2 253 aaKnown RBP15.47■□□□□ 0.07
SMCO4-206ENST00000596676 A0A1W2PR77 199 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 MROH6A6NGR9 719 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 PRAMEF26H0Y7S4 382 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 PSMD11O00231 422 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 GAPDHSO14556 408 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SOD1P00441 154 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 PRSS56P0CW18 603 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 LPOP22079 712 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 NPY2RP49146 381 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 CSNK1EP49674 416 aaKnown RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 ARSDP51689 593 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 NHLH1Q02575 133 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 DHX9Q08211 1270 aaKnown RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 INPP5AQ14642 412 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SMAD1Q15797 465 aaKnown RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SPDYCQ5MJ68 293 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 TEX35Q5T0J7 233 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 PCGF5Q86SE9 256 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 IGDCC3Q8IVU1 814 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 DCLK2Q8N568 766 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 TMEM145Q8NBT3 493 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 OR13H1Q8NG92 308 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 ASB12Q8WXK4 309 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 AP2M1Q96CW1 435 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SIGLEC10Q96LC7 697 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 LENG8Q96PV6 779 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SEMA4AQ9H3S1 761 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 TRABDQ9H4I3 376 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 SUDS3Q9H7L9 328 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-206ENST00000596676 PKD2L2Q9NZM6 624 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 WHRNQ9P202 907 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 FKBPLQ9UIM3 349 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 RAB23Q9ULC3 237 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 OR1A2Q9Y585 309 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 WDR87Q6ZQQ6 2873 aa15.46■□□□□ 0.07
SMCO4-206ENST00000596676 MYO15AQ9UKN7 3530 aa15.45■□□□□ 0.06
SMCO4-206ENST00000596676 OR51F1A6NGY5 319 aa15.45■□□□□ 0.06
SMCO4-206ENST00000596676 C2orf81A6NN90 581 aa15.45■□□□□ 0.06
SMCO4-206ENST00000596676 FADS2P1A8MWK0 482 aa15.45■□□□□ 0.06
SMCO4-206ENST00000596676 STX7O15400 261 aaKnown RBP15.45■□□□□ 0.06
SMCO4-206ENST00000596676 UGT1A9O60656 530 aa15.45■□□□□ 0.06
SMCO4-206ENST00000596676 EPN2O95208 641 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms