RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 DNASE1L2Q92874 299 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 FAM129BQ96TA1 746 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 ZDHHC4Q9NPG8 344 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 CACNA2D2Q9NY47 1150 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 SARDHQ9UL12 918 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 PPM1HQ9ULR3 514 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 UPK3BL1B0FP48 263 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 UPK3BL2E5RIL1 263 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 SHOX2O60902 331 aaPredicted RBP20.77■□□□□ 0.92
PNKP-203ENST00000593946 S1PR4O95977 384 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 TIMP2P16035 220 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 LHCGRP22888 699 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 RPA3P35244 121 aaPredicted RBP20.77■□□□□ 0.92
PNKP-203ENST00000593946 SERPINB8P50452 374 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 XIAPP98170 497 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 SEMA3AQ14563 771 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 E2F5Q15329 346 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 TYSND1Q2T9J0 566 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 LRRC66Q68CR7 880 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 RALGPS2Q86X27 583 aaPredicted RBP20.77■□□□□ 0.92
PNKP-203ENST00000593946 ANKRD42Q8N9B4 389 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 ACVR1CQ8NER5 493 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 SCG3Q8WXD2 468 aaKnown RBP20.77■□□□□ 0.92
PNKP-203ENST00000593946 CENPTQ96BT3 561 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 SNX15Q9NRS6 342 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 INTS9Q9NV88 658 aaKnown RBP20.77■□□□□ 0.92
PNKP-203ENST00000593946 NKIRAS1Q9NYS0 192 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 B4GALT6Q9UBX8 382 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 SUN2Q9UH99 717 aa20.77■□□□□ 0.92
PNKP-203ENST00000593946 LRRK1Q38SD2 2015 aa20.77■□□□□ 0.91
PNKP-203ENST00000593946 C16orf96A6NNT2 1141 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 A6NNZ2 444 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 NPC1O15118 1278 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 CHRM1P11229 460 aaPredicted RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 MC4RP32245 332 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 KIR2DL1P43626 348 aaPredicted RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 CSRP3P50461 194 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 NEK3P51956 506 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 STC1P52823 247 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 TUBB8Q3ZCM7 444 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 LEXMQ3ZCV2 418 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 FASTKD1Q53R41 847 aaKnown RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 LRRC73Q5JTD7 316 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 CNSTQ6PJW8 725 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 LDB1Q86U70 411 aaPredicted RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 ZNF513Q8N8E2 541 aaPredicted RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 PNPLA1Q8N8W4 532 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 C8orf33Q9H7E9 229 aaPredicted RBP20.76■□□□□ 0.91
PNKP-203ENST00000593946 PCMTD2Q9NV79 361 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 STON1Q9Y6Q2 735 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 PIAS3Q9Y6X2 628 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 PLXNB3Q9ULL4 1909 aa20.76■□□□□ 0.91
PNKP-203ENST00000593946 A8MX80 341 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 ZWINTO95229 277 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 EPHX1P07099 455 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 TYK2P29597 1187 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 POLD2P49005 469 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 SEMG2Q02383 582 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 TTC19Q6DKK2 380 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 PARS2Q7L3T8 475 aaKnown RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 CMC1Q7Z7K0 106 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 SDCCAG8Q86SQ7 713 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 DEFB123Q8N688 67 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PIP4K2CQ8TBX8 421 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PCDH12Q9NPG4 1184 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PRSS16Q9NQE7 514 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 HEBP1Q9NRV9 189 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PLXNA2O75051 1894 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 FAM95CA0A1B0GW59 222 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 KPNA3O00505 521 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 GAPDHSO14556 408 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 COPEO14579 308 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 TM9SF1O15321 606 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 ASGR2P07307 311 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PRSS56P0CW18 603 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 CYP2A6P11509 494 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 NFKBIAP25963 317 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 ITGB7P26010 798 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 CLCN5P51795 746 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PTSQ03393 145 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 ILF2Q12905 390 aaKnown RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 PDE1CQ14123 709 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 POM121L1PQ3SYA9 428 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 CBARPQ8N350 705 aaPredicted RBP20.75■□□□□ 0.91
PNKP-203ENST00000593946 MGARPQ8TDB4 240 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 TCP10LQ8TDR4 215 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 TCF12Q99081 682 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 CAB39LQ9H9S4 337 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 PSD3Q9NYI0 1048 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 SLC39A10Q9ULF5 831 aa20.75■□□□□ 0.91
PNKP-203ENST00000593946 ZNF30P17039 623 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 BPIP17213 487 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 VIPR1P32241 457 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 WDR4P57081 412 aaKnown RBP20.74■□□□□ 0.91
PNKP-203ENST00000593946 GNGT1P63211 74 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 PSAPL1Q6NUJ1 521 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 CDHR3Q6ZTQ4 885 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 DSG4Q86SJ6 1040 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 TTC7BQ86TV6 843 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms