RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HEMGNQ9BXL5 484 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 TEX101Q9BY14 249 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 SLC25A51Q9H1U9 297 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 WDR26Q9H7D7 661 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 USP29Q9HBJ7 922 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 MRPL40Q9NQ50 206 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 TMEM8BA6NDV4 472 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 ANKRD66B4E2M5 251 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 TNFRSF10CO14798 259 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 CLDN7O95471 211 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 SOD1P00441 154 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 ZNF30P17039 623 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 CTNNA2P26232 953 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 STC1P52823 247 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 NAP1L1P55209 391 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 INSM1Q01101 510 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 WASHC5Q12768 1159 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 HES3Q5TGS1 186 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 BBS12Q6ZW61 710 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 FSTL5Q8N475 847 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 ATL2Q8NHH9 583 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 HAUS1Q96CS2 278 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 TEKT5Q96M29 485 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 DESI2Q9BSY9 194 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 ABCG8Q9H221 673 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 GLOD4Q9HC38 313 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 TRIM10Q9UDY6 481 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 CELSR3Q9NYQ7 3312 aa18.46■□□□□ 0.55
SHKBP1-202ENST00000593764 TNFP01375 233 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 FUCA1P04066 466 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 ANXA6P08133 673 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 MYCLP1P12525 358 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 CTSEP14091 401 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 JUPP14923 745 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 KELP23276 732 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 TEAD1P28347 426 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 CD68P34810 354 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 COPS2P61201 443 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 E2F1Q01094 437 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 ELOCQ15369 112 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 TCEA2Q15560 299 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 C6orf132Q5T0Z8 1188 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 LVRNQ6Q4G3 990 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 ZC3H18Q86VM9 953 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 NLRP8Q86W28 1048 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 HEATR4Q86WZ0 1026 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 SLC35F3Q8IY50 421 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 SDR16C5Q8N3Y7 309 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 SPATA22Q8NHS9 363 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 ALG3Q92685 438 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 SCAMP4Q969E2 229 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 MLPHQ9BV36 600 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 CD84Q9UIB8 345 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 DNPEPQ9ULA0 475 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 ZMIZ1Q9ULJ6 1067 aa18.45■□□□□ 0.54
SHKBP1-202ENST00000593764 RP1P56715 2156 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 CCDC66A2RUB6 948 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 EME2A4GXA9 379 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 TRABD2BA6NFA1 517 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 PDE2AO00408 941 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 MT-CYBP00156 380 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 CEACAM5P06731 702 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 GP1BAP07359 652 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 DUSP3P51452 185 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 CDK3Q00526 305 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 GALNT3Q14435 633 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 SLC14A2Q15849 920 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 RAET1GQ6H3X3 334 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 GUSBP11Q6P575 273 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 ZNF765Q7L2R6 523 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 KDELC2Q7Z4H8 507 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 RAVER1Q8IY67 606 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 NRSN1Q8IZ57 195 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 CACTIN-AS1Q8N1I8 211 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 IFI44Q8TCB0 444 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 AP2M1Q96CW1 435 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 EID2BQ96D98 161 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 WDR24Q96S15 920 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 ADGRE3Q9BY15 652 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 FRMD8Q9BZ67 464 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 TMEM168Q9H0V1 697 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 PHPT1Q9NRX4 125 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 NCKIPSDQ9NZQ3 722 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 EFR3BQ9Y2G0 817 aa18.44■□□□□ 0.54
SHKBP1-202ENST00000593764 LAMA5O15230 3695 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 MYLKQ15746 1914 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 PRSS38A1L453 326 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 MACROD2A1Z1Q3 448 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 APOC4-APOC2K7ER74 178 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 TAF4O00268 1085 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 OPA1O60313 960 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 APOC2P02655 101 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 PTPN7P35236 360 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 RWDD2BP57060 319 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 KIF5AQ12840 1032 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 TARDBPQ13148 414 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 NR0B2Q15466 257 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 AADACL2Q6P093 401 aa18.43■□□□□ 0.54
SHKBP1-202ENST00000593764 PTCD2Q8WV60 388 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms