RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 FOXR1Q6PIV2 292 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 TECPR1Q7Z6L1 1165 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 RHOT2Q8IXI1 618 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 OR6C4Q8NGE1 309 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 ZNF578Q96N58 590 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 LGMNQ99538 433 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 FRMD8Q9BZ67 464 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 CD84Q9UIB8 345 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 HEY1Q9Y5J3 304 aa13.07□□□□□ -0.32
PRKCSH-218ENST00000593053 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PMS2P1A4D2B8 440 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 CAPN8A6NHC0 703 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 AKR1B15C9JRZ8 316 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 KCNK1O00180 336 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 NOBOXO60393 691 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 MTA2O94776 668 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PRLP01236 227 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 JCHAINP01591 159 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 FUCA1P04066 466 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 KRT1P04264 644 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 TNNT1P13805 278 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 CA4P22748 312 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 TEAD1P28347 426 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 RBMS1P29558 406 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 GPR1P46091 355 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 GNPDA1P46926 289 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 POLD2P49005 469 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PDX1P52945 283 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PCBP4P57723 403 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PTSQ03393 145 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 DPTQ07507 201 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 OGFOD3Q6PK18 319 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 DOK6Q6PKX4 331 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PLD5Q8N7P1 536 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 Q8N9G6 341 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 ZNF248Q8NDW4 579 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 SCAMP4Q969E2 229 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 HIC2Q96JB3 615 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 ABCG8Q9H221 673 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 SUFUQ9UMX1 484 aa13.06□□□□□ -0.32
PRKCSH-218ENST00000593053 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 A0A1W2PQM1 296 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ZNF487B1APH4 448 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 D6RAR5 112 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 APOL1O14791 398 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 SOD1P00441 154 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 GLB1P16278 677 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ZNF30P17039 623 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 CD86P42081 329 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 STC1P52823 247 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ERVPABLB-1P60509 514 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 TLE3Q04726 772 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ILF3Q12906 894 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ZBTB17Q13105 803 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 C14orf28Q4W4Y0 310 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 NRROSQ86YC3 692 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 CCNJLQ8IV13 435 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 KIAA1524Q8TCG1 905 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 SLC46A1Q96NT5 459 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 CEP41Q9BYV8 373 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 EPB41L5Q9HCM4 733 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 SPATS2LQ9NUQ6 558 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
PRKCSH-218ENST00000593053 SLC17A4Q9Y2C5 497 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms