RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 FRMD8P1Q9BZ68 369 aaPredicted RBP18.02■□□□□ 0.48
VAT1-208ENST00000590924 SLC13A1Q9BZW2 595 aa18.02■□□□□ 0.48
VAT1-208ENST00000590924 SUV39H2Q9H5I1 410 aa18.02■□□□□ 0.48
VAT1-208ENST00000590924 POLR1BQ9H9Y6 1135 aa18.02■□□□□ 0.48
VAT1-208ENST00000590924 HAUS2Q9NVX0 235 aa18.02■□□□□ 0.48
VAT1-208ENST00000590924 SEPT3Q9UH03 358 aa18.02■□□□□ 0.48
VAT1-208ENST00000590924 CPED1A4D0V7 1026 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 MTSS1O43312 755 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 PECAM1P16284 738 aaPredicted RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 RPIAP49247 311 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 PCBP4P57723 403 aaKnown RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 PPARDQ03181 441 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 LRRC14Q15048 493 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 AGERQ15109 404 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 UGP2Q16851 508 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 FAXCQ5TGI0 409 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 BRAT1Q6PJG6 821 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 IGF2-ASQ6U949 168 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 SLC13A5Q86YT5 568 aaPredicted RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 SPACA3Q8IXA5 215 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 SLC35F3Q8IY50 421 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 CCDC13Q8IYE1 715 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 ZNF248Q8NDW4 579 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 TFB1MQ8WVM0 346 aaKnown RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 NAT6Q93015 286 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 HIC2Q96JB3 615 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 FCRL3Q96P31 734 aaPredicted RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 TUBGCP5Q96RT8 1024 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 SAE1Q9UBE0 346 aaPredicted RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 TTC7AQ9ULT0 858 aaPredicted RBP18.01■□□□□ 0.47
VAT1-208ENST00000590924 SNX12Q9UMY4 172 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
VAT1-208ENST00000590924 EIF4E1BA6NMX2 242 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 TCEA3O75764 348 aa18■□□□□ 0.47
VAT1-208ENST00000590924 TUBB4AP04350 444 aa18■□□□□ 0.47
VAT1-208ENST00000590924 ATP1A1P05023 1023 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 ANXA6P08133 673 aa18■□□□□ 0.47
VAT1-208ENST00000590924 C6P13671 934 aa18■□□□□ 0.47
VAT1-208ENST00000590924 CCNB1P14635 433 aa18■□□□□ 0.47
VAT1-208ENST00000590924 TSHRP16473 764 aa18■□□□□ 0.47
VAT1-208ENST00000590924 TCP1P17987 556 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 CES1P23141 567 aa18■□□□□ 0.47
VAT1-208ENST00000590924 MMP12P39900 470 aa18■□□□□ 0.47
VAT1-208ENST00000590924 BLKP51451 505 aa18■□□□□ 0.47
VAT1-208ENST00000590924 ERVPABLB-1P60509 514 aa18■□□□□ 0.47
VAT1-208ENST00000590924 ETF1P62495 437 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
VAT1-208ENST00000590924 C1orf61Q13536 156 aa18■□□□□ 0.47
VAT1-208ENST00000590924 WSCD2Q2TBF2 565 aa18■□□□□ 0.47
VAT1-208ENST00000590924 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
VAT1-208ENST00000590924 PAPD7Q5XG87 772 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 RASGEF1CQ8N431 466 aa18■□□□□ 0.47
VAT1-208ENST00000590924 ACTL9Q8TC94 416 aa18■□□□□ 0.47
VAT1-208ENST00000590924 LGMNQ99538 433 aa18■□□□□ 0.47
VAT1-208ENST00000590924 FERMT1Q9BQL6 677 aa18■□□□□ 0.47
VAT1-208ENST00000590924 CLPBQ9H078 707 aa18■□□□□ 0.47
VAT1-208ENST00000590924 PCDH12Q9NPG4 1184 aa18■□□□□ 0.47
VAT1-208ENST00000590924 ASCL3Q9NQ33 180 aa18■□□□□ 0.47
VAT1-208ENST00000590924 EIF2AK3Q9NZJ5 1116 aaKnown RBP18■□□□□ 0.47
VAT1-208ENST00000590924 COQ6Q9Y2Z9 468 aa18■□□□□ 0.47
VAT1-208ENST00000590924 MGAQ8IWI9 3026 aa18■□□□□ 0.47
VAT1-208ENST00000590924 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 CEP104O60308 925 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 MAP3K6O95382 1288 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 MMP13P45452 471 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 HK3P52790 923 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 IFI35P80217 286 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 OTUD4Q01804 1114 aaKnown RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 AP1B1Q10567 949 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 PRKD1Q15139 912 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 PERM1Q5SV97 790 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 ERAP2Q6P179 960 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 RBM44Q6ZP01 1051 aaKnown RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 SDR16C5Q8N3Y7 309 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 FSTL5Q8N475 847 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 TSEN2Q8NCE0 465 aaKnown RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 WDR48Q8TAF3 677 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 HAUS1Q96CS2 278 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 WDR24Q96S15 920 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 OSBPL9Q96SU4 736 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 NAP1L3Q99457 506 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 NAPGQ99747 312 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 CINPQ9BW66 212 aaPredicted RBP17.99■□□□□ 0.47
VAT1-208ENST00000590924 ATP8A1Q9Y2Q0 1164 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 ENTPD2Q9Y5L3 495 aa17.99■□□□□ 0.47
VAT1-208ENST00000590924 TEX51A0A1B0GUA7 166 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 TK2O00142 265 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 MUSKO15146 869 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 ATXN7O15265 892 aaPredicted RBP17.98■□□□□ 0.47
VAT1-208ENST00000590924 YY2O15391 372 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 ALPIP09923 528 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 HTR1BP28222 390 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 SERPINA4P29622 427 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 CXCR5P32302 372 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 RGRP47804 291 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 ZNF235Q14590 738 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 NFATC4Q14934 902 aa17.98■□□□□ 0.47
VAT1-208ENST00000590924 ELOCQ15369 112 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms