RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CCDC157Q569K6 752 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 PRRT3Q5FWE3 981 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 BZW1Q7L1Q6 419 aaKnown RBP18.2■□□□□ 0.5
DDX39A-212ENST00000590260 PEX26Q7Z412 305 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 HID1Q8IV36 788 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 HTR3CQ8WXA8 447 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 TBATAQ96M53 351 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 WDR92Q96MX6 357 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 UBP1Q9NZI7 540 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 MSRB2Q9Y3D2 182 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 HACD1B0YJ81 288 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 H3BM21 787 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 CASC3O15234 703 aaKnown RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 YY2O15391 372 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 ARHGAP6O43182 974 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 PIRTP0C851 137 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 ZNF30P17039 623 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 EPHB1P54762 984 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 SRP54P61011 504 aaKnown RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 PPARDQ03181 441 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 DPTQ07507 201 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 KLF1Q13351 362 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 XRCC4Q13426 336 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 ARHGEF7Q14155 803 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 SMAD1Q15797 465 aaKnown RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 PCSK7Q16549 785 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 FAXCQ5TGI0 409 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 TMPRSS7Q7RTY8 843 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 LYSMD3Q7Z3D4 306 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 HEATR4Q86WZ0 1026 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 FAM181AQ8N9Y4 354 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 BTN2A2Q8WVV5 523 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 MLPHQ9BV36 600 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 FRMD8Q9BZ67 464 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-212ENST00000590260 PCDHGA1Q9Y5H4 931 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 SPO11Q9Y5K1 396 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 ST14Q9Y5Y6 855 aa18.19■□□□□ 0.5
DDX39A-212ENST00000590260 RFPL3O75679 317 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CAPNS1P04632 268 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CEACAM5P06731 702 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 MYCLP1P12525 358 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CKMT1AP12532 417 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 TEAD1P28347 426 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CDK3Q00526 305 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CDK18Q07002 472 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 CCNI2Q6ZMN8 369 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-212ENST00000590260 RD3Q7Z3Z2 195 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 SFTPA2Q8IWL1 248 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
DDX39A-212ENST00000590260 OR56A4Q8NGH8 313 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 MRGPRX2Q96LB1 330 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 FCRL5Q96RD9 977 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 BOCQ9BWV1 1114 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 WDR26Q9H7D7 661 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 GRPEL1Q9HAV7 217 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 USP29Q9HBJ7 922 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 HAUS2Q9NVX0 235 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 SPASTQ9UBP0 616 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 KLQ9UEF7 1012 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 GUCA1BQ9UMX6 200 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 R3HDM2Q9Y2K5 976 aaKnown RBP18.18■□□□□ 0.5
DDX39A-212ENST00000590260 DGKBQ9Y6T7 804 aa18.18■□□□□ 0.5
DDX39A-212ENST00000590260 C1orf232A0A0U1RR37 186 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 LOC285095A0A1B0GVY8 99 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 LMO7DNF2Z398 122 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CACNB4O00305 520 aaPredicted RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 AURKAO14965 403 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 PMPCBO75439 489 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 RASGRP1O95267 797 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CA4P22748 312 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 POLD2P49005 469 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CAMK2BQ13554 666 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 ZNF765Q7L2R6 523 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 TRIM74Q86UV6 250 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 NLRP8Q86W28 1048 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 SLC35F3Q8IY50 421 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 SYCE1Q8N0S2 351 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CCL4L1Q8NHW4 92 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 AP2M1Q96CW1 435 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 RIOK2Q9BVS4 552 aaKnown RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 SLC13A1Q9BZW2 595 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 KLHL8Q9P2G9 620 aaPredicted RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CNOT6Q9ULM6 557 aaKnown RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 PCYT1BQ9Y5K3 369 aaPredicted RBP18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CEP295Q9C0D2 2601 aa18.17■□□□□ 0.5
DDX39A-212ENST00000590260 CHD8Q9HCK8 2581 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 FADS2P1A8MWK0 482 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 H7C0C1 242 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 TPP1O14773 563 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 TNFRSF10CO14798 259 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 RBP3P10745 1247 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 NFKBIAP25963 317 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 HTR1BP28222 390 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 CHRNA4P43681 627 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 ATP5OP48047 213 aa18.16■□□□□ 0.5
DDX39A-212ENST00000590260 SPINT3P49223 89 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms