RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 BROXQ5VW32 411 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 ALKBH5Q6P6C2 394 aaKnown RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 RAB11FIP2Q7L804 512 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 C17orf82Q86X59 251 aaPredicted RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 ZNF843Q8N446 348 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 SNRNP27Q8WVK2 155 aaKnown RBP17.99■□□□□ 0.47
H3F3B-209ENST00000589949 PATE1Q8WXA2 126 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 SEMA3CQ99985 751 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 PACSIN1Q9BY11 444 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 SEMA4CQ9C0C4 833 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 LRIT1Q9P2V4 623 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 PLEKHM1Q9Y4G2 1056 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 UNC13CQ8NB66 2214 aa17.99■□□□□ 0.47
H3F3B-209ENST00000589949 CCNB1P14635 433 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 SLC5A2P31639 672 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 CCKBRP32239 447 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 GJC1P36383 396 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 ETV5P41161 510 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 UCNP55089 124 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 DSC2Q02487 901 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 VAC14Q08AM6 782 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 GALNT2Q10471 571 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 KRT81Q14533 505 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 PAFAH1B3Q15102 231 aaKnown RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 TGIF1Q15583 401 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 ARMC12Q5T9G4 340 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 FBXO39Q8N4B4 442 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 LSM14AQ8ND56 463 aaKnown RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 OR6C4Q8NGE1 309 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 MAML1Q92585 1016 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 TTC9Q92623 222 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 AGAP2Q99490 1192 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 PHPT1Q9NRX4 125 aaPredicted RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 RCOR3Q9P2K3 495 aaPredicted RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 CD84Q9UIB8 345 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 SUFUQ9UMX1 484 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 SCN8AQ9UQD0 1980 aa17.98■□□□□ 0.47
H3F3B-209ENST00000589949 HELZ2Q9BYK8 2649 aaKnown RBP17.98■□□□□ 0.47
H3F3B-209ENST00000589949 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 MYO1FO00160 1098 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 PRLP01236 227 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 CYP2A6P11509 494 aaPredicted RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 PNLIPP16233 465 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 ITIH1P19827 911 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 CASP14P31944 242 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SERPINB6P35237 376 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 MLLT3P42568 568 aaPredicted RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SSR1P43307 286 aaKnown RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 GNPDA1P46926 289 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 PTSQ03393 145 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 NIPAL4Q0D2K0 466 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 C19orf57Q0VDD7 668 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 RALGPS1Q5JS13 557 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 LRRC66Q68CR7 880 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 TRIM74Q86UV6 250 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SLITRK4Q8IW52 837 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 ARRDC2Q8TBH0 407 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 ZNF564Q8TBZ8 553 aaPredicted RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SCAMP4Q969E2 229 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 ABCG8Q9H221 673 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SEMA6CQ9H3T2 930 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 TAAR2Q9P1P5 351 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 SLC17A4Q9Y2C5 497 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 TMEM98Q9Y2Y6 226 aa17.97■□□□□ 0.47
H3F3B-209ENST00000589949 LUC7L2Q9Y383 392 aaKnown RBP17.97■□□□□ 0.47
H3F3B-209ENST00000589949 GOLGA6CA6NDK9 693 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 GOLGA6BA6NDN3 693 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 K7ENP7 123 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ERVH48-1M5A8F1 160 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 PSMD11O00231 422 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
H3F3B-209ENST00000589949 NUDT21O43809 227 aaKnown RBP17.96■□□□□ 0.47
H3F3B-209ENST00000589949 GOLGA6DP0CG33 693 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ADCY8P40145 1251 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 OR1D5P58170 312 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 GBE1Q04446 702 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 DPTQ07507 201 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ANKRD20A8PQ5CZ79 823 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 KIAA1614Q5VZ46 1190 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ALG1LQ6GMV1 187 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 RAET1GQ6H3X3 334 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 INO80CQ6PI98 192 aaPredicted RBP17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ZNF574Q6ZN55 896 aaPredicted RBP17.96■□□□□ 0.47
H3F3B-209ENST00000589949 ZNF438Q7Z4V0 828 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 TMEM74Q96NL1 305 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 RDH14Q9HBH5 336 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 GOLGA6AQ9NYA3 693 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 PISDQ9UG56 409 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 CHKBQ9Y259 395 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 LOXL2Q9Y4K0 774 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 PCDHGA7Q9Y5G6 932 aa17.96■□□□□ 0.47
H3F3B-209ENST00000589949 PCYT1BQ9Y5K3 369 aaPredicted RBP17.96■□□□□ 0.47
H3F3B-209ENST00000589949 A0A0J9YYE9 177 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 MATN3O15232 486 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms