RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 LRRC14Q15048 493 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 AGERQ15109 404 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 TRADDQ15628 312 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 Q6ZVL8 140 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 CYP2U1Q7Z449 544 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 TECPR1Q7Z6L1 1165 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 ZCCHC9Q8N567 271 aaKnown RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 DENND6BQ8NEG7 585 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 PTCD2Q8WV60 388 aaKnown RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 LENG8Q96PV6 779 aaPredicted RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 FOXP3Q9BZS1 431 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 CDH19Q9H159 772 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 MIR1-1HGQ9H1L0 117 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 BPIFA1Q9NP55 256 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 SYBUQ9NX95 663 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 IL17CQ9P0M4 197 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 MTRF1LQ9UGC7 380 aaKnown RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 EIF2B4Q9UI10 523 aaKnown RBP13.6□□□□□ -0.23
VMP1-210ENST00000589823 TCAF1Q9Y4C2 921 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 NUMA1Q14980 2115 aa13.6□□□□□ -0.23
VMP1-210ENST00000589823 C10orf142B7Z368 130 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 PRAMEF26H0Y7S4 382 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 TP73O15350 636 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 SPAM1P38567 509 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 PTGER3P43115 390 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
VMP1-210ENST00000589823 CRADDP78560 199 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
VMP1-210ENST00000589823 CUL1Q13616 776 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 FNBP1LQ5T0N5 605 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 TSTD2Q5T7W7 516 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 CENPUQ71F23 418 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 ZNF765Q7L2R6 523 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 OR13C4Q8NGS5 318 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 UBXN4Q92575 508 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 ATOH1Q92858 354 aaPredicted RBP13.59□□□□□ -0.23
VMP1-210ENST00000589823 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 EID2BQ96D98 161 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 LRRC39Q96DD0 335 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 DNAJC1Q96KC8 554 aaKnown RBP13.59□□□□□ -0.23
VMP1-210ENST00000589823 MYOCQ99972 504 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 C19orf43Q9BQ61 176 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 ABCG8Q9H221 673 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 MRM3Q9HC36 420 aaKnown RBP13.59□□□□□ -0.23
VMP1-210ENST00000589823 FZD3Q9NPG1 666 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 GDF3Q9NR23 364 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 CHRAC1Q9NRG0 131 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 CD84Q9UIB8 345 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 HCN4Q9Y3Q4 1203 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 MAD1L1Q9Y6D9 718 aa13.59□□□□□ -0.23
VMP1-210ENST00000589823 CCDC78A2IDD5 438 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 MROH6A6NGR9 719 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 FPGTO14772 594 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.24
VMP1-210ENST00000589823 PCCBP05166 539 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 BPIP17213 487 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 GM2AP17900 193 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 MAOBP27338 520 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 DPP6P42658 865 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 DCDC1P59894 354 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 TMPRSS15P98073 1019 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 PDIA2Q13087 525 aaKnown RBP13.58□□□□□ -0.24
VMP1-210ENST00000589823 STAT4Q14765 748 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 WSCD2Q2TBF2 565 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 ALS2CLQ60I27 953 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 RAET1GQ6H3X3 334 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 RFLNAQ6ZTI6 216 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 CEP128Q6ZU80 1094 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 MPP5Q8N3R9 675 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 TP53I13Q8NBR0 393 aaPredicted RBP13.58□□□□□ -0.24
VMP1-210ENST00000589823 GPR26Q8NDV2 337 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 RUBCNQ92622 972 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 PEX13Q92968 403 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 SCAMP4Q969E2 229 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 PLEKHG4BQ96PX9 1271 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 KIFC1Q9BW19 673 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 SPATA16Q9BXB7 569 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 TSPYL1Q9H0U9 437 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 EPC1Q9H2F5 836 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 AASDHPPTQ9NRN7 309 aa13.58□□□□□ -0.24
VMP1-210ENST00000589823 ZDHHC18Q9NUE0 388 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms