RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 SEMA3CQ99985 751 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.45
VAT1-206ENST00000589709 POLR1EQ9GZS1 481 aaKnown RBP12.21□□□□□ -0.45
VAT1-206ENST00000589709 DPEP2Q9H4A9 486 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 SYNDIG1Q9H7V2 258 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 LRIT1Q9P2V4 623 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 UVRAGQ9P2Y5 699 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 ACSL6Q9UKU0 697 aa12.21□□□□□ -0.45
VAT1-206ENST00000589709 PMS2P1A4D2B8 440 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 MATN3O15232 486 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 PROSCO94903 275 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 FUCA1P04066 466 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 IVLP07476 585 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 PDHA1P08559 390 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 CD48P09326 243 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 CCNCP24863 283 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 UGT1A5P35504 534 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 SSR1P43307 286 aaKnown RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 CDK3Q00526 305 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 VAC14Q08AM6 782 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
VAT1-206ENST00000589709 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 PEX6Q13608 980 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 PDK2Q15119 407 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 CLPPQ16740 277 aaPredicted RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 SPECC1LQ69YQ0 1117 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 NRROSQ86YC3 692 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 CCL4L1Q8NHW4 92 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 ZNF564Q8TBZ8 553 aaPredicted RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 GSDMCQ9BYG8 508 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 CARS2Q9HA77 564 aaKnown RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 EPB41L5Q9HCM4 733 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 NT5MQ9NPB1 228 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
VAT1-206ENST00000589709 HAUS2Q9NVX0 235 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 MOSPD1Q9UJG1 213 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 SLC17A4Q9Y2C5 497 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 RNF215Q9Y6U7 377 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
VAT1-206ENST00000589709 UNC13CQ8NB66 2214 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 A0A0J9YYE9 177 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 CAPN8A6NHC0 703 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 NVLO15381 856 aaKnown RBP12.19□□□□□ -0.46
VAT1-206ENST00000589709 MFSD11O43934 449 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 C1QL1O75973 258 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 TRBC1P01850 177 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 FGF1P05230 155 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 PYGLP06737 847 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 KRT7P08729 469 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 H2AFZP0C0S5 128 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ZNF30P17039 623 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 MX2P20592 715 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 RPL26P61254 145 aaKnown RBP12.19□□□□□ -0.46
VAT1-206ENST00000589709 B4GALNT1Q00973 533 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 NR1D2Q14995 579 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 IFI16Q16666 785 aaKnown RBP12.19□□□□□ -0.46
VAT1-206ENST00000589709 ATP13A4Q4VNC1 1196 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ANKRD20A8PQ5CZ79 823 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ARHGAP40Q5TG30 622 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 DENND2CQ68D51 928 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 NCBP2-AS2Q69YL0 99 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 PCSK4Q6UW60 755 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ADAMTSL4Q6UY14 1074 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 H2AFVQ71UI9 128 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ZNF765Q7L2R6 523 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 ZNF438Q7Z4V0 828 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 TSPAN33Q86UF1 283 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 Q8N9G6 341 aaPredicted RBP12.19□□□□□ -0.46
VAT1-206ENST00000589709 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 FAF2Q96CS3 445 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 FOXP3Q9BZS1 431 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 CTTNBP2NLQ9P2B4 639 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 DNPEPQ9ULA0 475 aa12.19□□□□□ -0.46
VAT1-206ENST00000589709 RPL26L1Q9UNX3 145 aaKnown RBP12.19□□□□□ -0.46
VAT1-206ENST00000589709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.46
VAT1-206ENST00000589709 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
VAT1-206ENST00000589709 B4DGG1 531 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 K7ENP7 123 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 ZW10O43264 779 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 B4GAT1O43505 415 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 SOD1P00441 154 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 TPM3P06753 285 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 CTPS1P17812 591 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 SLC5A2P31639 672 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 CASP14P31944 242 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 MAN1A1P33908 653 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 GPR1P46091 355 aa12.18□□□□□ -0.46
VAT1-206ENST00000589709 PTSQ03393 145 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms