RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 APPL1Q9UKG1 709 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 RP1P56715 2156 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 CCNB1P14635 433 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 AK4P27144 223 aaPredicted RBP14.32□□□□□ -0.12
VMP1-206ENST00000587945 UGT1A5P35504 534 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 GARSP41250 739 aaKnown RBP14.32□□□□□ -0.12
VMP1-206ENST00000587945 DSC2Q02487 901 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 GALNT2Q10471 571 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 CLN3Q13286 438 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 ARHGEF7Q14155 803 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 RALGPS1Q5JS13 557 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 DOK6Q6PKX4 331 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 USP45Q70EL2 814 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 TMPRSS9Q7Z410 1059 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 SPRED1Q7Z699 444 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 TECPR1Q7Z6L1 1165 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 CLEC14AQ86T13 490 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 JAMLQ86YT9 394 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 KCTD6Q8NC69 237 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 GPBAR1Q8TDU6 330 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 STRADBQ9C0K7 418 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 CTTNBP2NLQ9P2B4 639 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 PPIL1Q9Y3C6 166 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 TTLL3Q9Y4R7 772 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 ST14Q9Y5Y6 855 aa14.32□□□□□ -0.12
VMP1-206ENST00000587945 COL27A1Q8IZC6 1860 aaPredicted RBP14.31□□□□□ -0.12
VMP1-206ENST00000587945 TK2O00142 265 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PSMD11O00231 422 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 B4GAT1O43505 415 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 FZD6O60353 706 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PROSCO94903 275 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 FGF1P05230 155 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 ITGA2BP08514 1039 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 NFKBIAP25963 317 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 SLC5A2P31639 672 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 GPR1P46091 355 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 UCNP55089 124 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PAFAH1B3Q15102 231 aaKnown RBP14.31□□□□□ -0.12
VMP1-206ENST00000587945 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
VMP1-206ENST00000587945 ZSCAN23Q3MJ62 389 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 ANKRD20A8PQ5CZ79 823 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 FAM182AQ5T1J6 154 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 LRRC66Q68CR7 880 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 SLC30A9Q6PML9 568 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 TRIM74Q86UV6 250 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 LRRC49Q8IUZ0 686 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 ZDHHC1Q8WTX9 485 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PATE1Q8WXA2 126 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 MAML1Q92585 1016 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 SCAMP4Q969E2 229 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 IQCDQ96DY2 449 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 TMEM74Q96NL1 305 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 XPO4Q9C0E2 1151 aaKnown RBP14.31□□□□□ -0.12
VMP1-206ENST00000587945 POLR1EQ9GZS1 481 aaKnown RBP14.31□□□□□ -0.12
VMP1-206ENST00000587945 ABCG8Q9H221 673 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.12
VMP1-206ENST00000587945 TAAR2Q9P1P5 351 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PISDQ9UG56 409 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 PLEKHM1Q9Y4G2 1056 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 LOXL2Q9Y4K0 774 aa14.31□□□□□ -0.12
VMP1-206ENST00000587945 MATN3O15232 486 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ECEL1O95672 775 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 SOD1P00441 154 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 PNLIPP16233 465 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ITIH1P19827 911 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 CCKBRP32239 447 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ADCY8P40145 1251 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 MLLT3P42568 568 aaPredicted RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 OR1D5P58170 312 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 CTBSQ01459 385 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 PTSQ03393 145 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 GBE1Q04446 702 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 VAC14Q08AM6 782 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 NIPAL4Q0D2K0 466 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 C19orf57Q0VDD7 668 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ILF3Q12906 894 aaKnown RBP eCLIP14.3□□□□□ -0.12
VMP1-206ENST00000587945 SLC10A2Q12908 348 aaPredicted RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 AMZ1Q400G9 498 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 TAF1BQ53T94 588 aaPredicted RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 AP2M1Q96CW1 435 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 ZNF670Q9BS34 389 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 GSDMCQ9BYG8 508 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 SEMA6CQ9H3T2 930 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 RDH14Q9HBH5 336 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 TRNAU1APQ9NX07 287 aaKnown RBP14.3□□□□□ -0.12
VMP1-206ENST00000587945 KCTD5Q9NXV2 234 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 SLC17A4Q9Y2C5 497 aa14.3□□□□□ -0.12
VMP1-206ENST00000587945 MGAQ8IWI9 3026 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms