RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ARL5AQ9Y689 179 aa14.27□□□□□ -0.13
SKA2-205ENST00000580541 NUMA1Q14980 2115 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 E7ESA3 106 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 TOR1BO14657 336 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 TP73O15350 636 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 LDB2O43679 373 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 RECQL5O94762 991 aaPredicted RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 USP1O94782 785 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 FSBPO95073 299 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PAK4O96013 591 aaPredicted RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 SLC4A1P02730 911 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 GSTA2P09210 222 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PGAM1P18669 254 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 LHCGRP22888 699 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 AKT2P31751 481 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PPARGP37231 505 aaPredicted RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 DCDC1P59894 354 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PRAMEP78395 509 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 DMWDQ09019 674 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 LRRC14Q15048 493 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 TRADDQ15628 312 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PDPK2PQ6A1A2 396 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 ZDHHC24Q6UX98 284 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 CCNI2Q6ZMN8 369 aaPredicted RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 TTC30BQ8N4P2 665 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 ZBTB44Q8NCP5 570 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 DENND6BQ8NEG7 585 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 OR4K2Q8NGD2 314 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 SKA1Q96BD8 255 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 NUS1Q96E22 293 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 DTD2Q96FN9 168 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 COQ10AQ96MF6 247 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 TTC25Q96NG3 672 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 KCNH6Q9H252 994 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 ANKZF1Q9H8Y5 726 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 SAYSD1Q9NPB0 183 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 CHRAC1Q9NRG0 131 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 NLE1Q9NVX2 485 aaPredicted RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 SYBUQ9NX95 663 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 ZC3H7BQ9UGR2 993 aaKnown RBP14.26□□□□□ -0.13
SKA2-205ENST00000580541 NFU1Q9UMS0 254 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 INVSQ9Y283 1065 aa14.26□□□□□ -0.13
SKA2-205ENST00000580541 PLXND1Q9Y4D7 1925 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 MEI4A8MW99 385 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 PRAMEF26H0Y7S4 382 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 AURKAO14965 403 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 PFDN6O15212 129 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 SPINT1O43278 529 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 LATO43561 262 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 SPAG6O75602 509 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 TSHRP16473 764 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 HNRNPA2B1P22626 353 aaKnown RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 SPAM1P38567 509 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 ELK3P41970 407 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 MAGEA4P43358 317 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 SEMG2Q02383 582 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 DPTQ07507 201 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 STAT4Q14765 748 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 Q6ZVL8 140 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 HSD11B1LQ7Z5J1 315 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 TECPR1Q7Z6L1 1165 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 TMEM135Q86UB9 458 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 RELL1Q8IUW5 271 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 ZBED8Q8IZ13 594 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.25□□□□□ -0.132e-9■■■■■ 43.2
SKA2-205ENST00000580541 AP2M1Q96CW1 435 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 ZSCAN5AQ9BUG6 496 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 C6orf106Q9H6K1 298 aaPredicted RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 NFKBIL1Q9UBC1 381 aaPredicted RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 MBD1Q9UIS9 605 aaPredicted RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 GGT7Q9UJ14 662 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 ZFR2Q9UPR6 939 aaKnown RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.25□□□□□ -0.13
SKA2-205ENST00000580541 HS3ST3A1Q9Y663 406 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 TEX264Q9Y6I9 313 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 SLC30A1Q9Y6M5 507 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 RPS6KL1Q9Y6S9 549 aa14.25□□□□□ -0.13
SKA2-205ENST00000580541 GLYATL1P3A0A0U1RQE8 302 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 A0A1W2PPC4 97 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 H7C0S8 307 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 FPGTO14772 594 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 SLC31A1O15431 190 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 MAGEC1O60732 1142 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 C1SP09871 688 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 GNSP15586 552 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 PSMA3P25788 255 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 CD27P26842 260 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 MAT2AP31153 395 aaKnown RBP14.24□□□□□ -0.13
SKA2-205ENST00000580541 ETV3P41162 512 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 ZNF140P52738 457 aaPredicted RBP14.24□□□□□ -0.13
SKA2-205ENST00000580541 CRADDP78560 199 aa14.24□□□□□ -0.13
SKA2-205ENST00000580541 SIM2Q14190 667 aaPredicted RBP14.24□□□□□ -0.13
SKA2-205ENST00000580541 GPR33Q49SQ1 333 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms