RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 TPM4P67936 248 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CDK3Q00526 305 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GALNT2Q10471 571 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 Q6ZVL8 140 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 USP45Q70EL2 814 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NRROSQ86YC3 692 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 LRRC49Q8IUZ0 686 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZNF843Q8N446 348 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FBXO39Q8N4B4 442 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TEX26Q8N6G2 289 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 KIAA1524Q8TCG1 905 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PIH1D2Q8WWB5 315 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 IQCDQ96DY2 449 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NT5MQ9NPB1 228 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 LRIT1Q9P2V4 623 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ATXN7L1Q9ULK2 861 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NENFQ9UMX5 172 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PPIL1Q9Y3C6 166 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 K7ENP7 123 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MYO1FO00160 1098 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FZD6O60353 706 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SOD1P00441 154 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GYPCP04921 128 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PDHA1P08559 390 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 HGFP14210 728 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CTPS1P17812 591 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SLC5A2P31639 672 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GARSP41250 739 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 UBASH3AP57075 661 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZFP36L1Q07352 338 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ILF3Q12906 894 aaKnown RBP eCLIP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ARHGEF7Q14155 803 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 DPYSL3Q14195 570 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NCBP2-AS2Q69YL0 99 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ALG1LQ6GMV1 187 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RAET1GQ6H3X3 334 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ALKBH5Q6P6C2 394 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 INO80CQ6PI98 192 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TECPR1Q7Z6L1 1165 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 C17orf82Q86X59 251 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SEMA3CQ99985 751 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GSDMCQ9BYG8 508 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SUDS3Q9H7L9 328 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TRNAU1APQ9NX07 287 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ACSL6Q9UKU0 697 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SLC17A4Q9Y2C5 497 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 LOXL2Q9Y4K0 774 aa16.61■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FLNBO75369 2602 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 A0A0U1RQS6 177 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GOLGA6CA6NDK9 693 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GOLGA6BA6NDN3 693 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GOLGA6DP0CG33 693 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SSR1P43307 286 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GNPDA1P46926 289 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MAZP56270 477 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CFHR1Q03591 330 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 DPTQ07507 201 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PAFAH1B3Q15102 231 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TAF1BQ53T94 588 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 LRRC66Q68CR7 880 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TMPRSS9Q7Z410 1059 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZNF438Q7Z4V0 828 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZNF564Q8TBZ8 553 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MAML1Q92585 1016 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TTC9Q92623 222 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 WBP1Q96G27 269 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SMIM14Q96QK8 99 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 POLR1EQ9GZS1 481 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GOLGA6AQ9NYA3 693 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TAAR2Q9P1P5 351 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PISDQ9UG56 409 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 LUC7L2Q9Y383 392 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ST14Q9Y5Y6 855 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SPTA1P02549 2419 aa16.6■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FGF1P05230 155 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 IVLP07476 585 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 JMJD7P0C870 316 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 AK4P27144 223 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GJC1P36383 396 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 POLD2P49005 469 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 B4GALNT1Q00973 533 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 IHHQ14623 411 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NR1D2Q14995 579 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 HADHQ16836 314 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ATP13A4Q4VNC1 1196 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CCDC122Q5T0U0 273 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CCDC81Q6ZN84 652 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RFLNAQ6ZTI6 216 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 JAMLQ86YT9 394 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZDHHC1Q8WTX9 485 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FATE1Q969F0 183 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZNF670Q9BS34 389 aa16.59■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TDRD1Q9BXT4 1180 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms