RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SLC23A3Q6PIS1 610 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 Q6ZVL8 140 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 HDXQ7Z353 690 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 MAATS1Q7Z4T9 603 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 GATAD2AQ86YP4 633 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 KLHL7Q8IXQ5 586 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 RBFAQ8N0V3 343 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 MINDY1Q8N5J2 469 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 PNPLA1Q8N8W4 532 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 MAIP1Q8WWC4 291 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 SCAMP4Q969E2 229 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CENPTQ96BT3 561 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 RMDN1Q96DB5 314 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 COQ10AQ96MF6 247 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 LENG8Q96PV6 779 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 FCRL5Q96RD9 977 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 LGR4Q9BXB1 951 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 C1QTNF2Q9BXJ5 285 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 SUDS3Q9H7L9 328 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 BPIFA1Q9NP55 256 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 GOLGA6AQ9NYA3 693 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 OGFRQ9NZT2 677 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 AMACRQ9UHK6 382 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 FAM153AQ9UHL3 310 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 PHTF1Q9UMS5 762 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF148Q9UQR1 794 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 BTBD3Q9Y2F9 522 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD6Q9Y2G4 727 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 NEU2Q9Y3R4 380 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF711Q9Y462 761 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 KCTD3Q9Y597 815 aa7.91□□□□□ -1.14
CCDC40-215ENST00000576033 PTPRZ1P23471 2315 aaPredicted RBP7.91□□□□□ -1.14
CCDC40-215ENST00000576033 C1orf232A0A0U1RR37 186 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 C5orf60A6NFR6 353 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 FADS2P1A8MWK0 482 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD66B4E2M5 251 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ARHGAP33O14559 1287 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 CASC3O15234 703 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 TTI1O43156 1089 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 LZTS3O60299 673 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PRSS56P0CW18 603 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 THEGLP0DJG4 465 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 MYF5P13349 255 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 TPH1P17752 444 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 CD38P28907 300 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 AKT2P31751 481 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 RPL22P35268 128 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ADRA1AP35348 466 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 COILP38432 576 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 CETN2P41208 172 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 GRIA4P48058 902 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 CARSP49589 748 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 AFF3P51826 1226 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 STC1P52823 247 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 NXPH1P58417 271 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 RACK1P63244 317 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 CDK18Q07002 472 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ELP6Q0PNE2 266 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PDE1CQ14123 709 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 GRM3Q14832 879 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 SLC1A5Q15758 541 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 DUOXA1Q1HG43 343 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 HLA-BQ31612 363 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 SPDYCQ5MJ68 293 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD22Q5VYY1 191 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 KCTD11Q693B1 232 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 DENND5AQ6IQ26 1287 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 DRICH1Q6PGQ1 229 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 Q6ZSR6 202 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ARHGEF18Q6ZSZ5 1173 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 USP45Q70EL2 814 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 BZW1Q7L1Q6 419 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ABI3BPQ7Z7G0 1075 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 JAMLQ86YT9 394 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 SFTPA2Q8IWL1 248 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 TTC30BQ8N4P2 665 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PDCD7Q8N8D1 485 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 TTC13Q8NBP0 860 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 BLOC1S5Q8TDH9 187 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 RAB7BQ96AH8 199 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 RTP4Q96DX8 246 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 NUS1Q96E22 293 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 DTD2Q96FN9 168 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 SCRN2Q96FV2 425 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PDXPQ96GD0 296 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 FEM1CQ96JP0 617 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PCED1AQ9H1Q7 454 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 KDM4CQ9H3R0 1056 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ETNK1Q9HBU6 452 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 EPB41L5Q9HCM4 733 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 MRPL40Q9NQ50 206 aaKnown RBP7.9□□□□□ -1.14
CCDC40-215ENST00000576033 GPR27Q9NS67 375 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 ZDHHC18Q9NUE0 388 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 UCKL1Q9NWZ5 548 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 SLC6A14Q9UN76 642 aa7.9□□□□□ -1.14
CCDC40-215ENST00000576033 PPIL1Q9Y3C6 166 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms