RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MAN1A1P33908 653 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 TRIM23P36406 574 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 GNPDA1P46926 289 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 ARSEP51690 589 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CXADRP78310 365 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCL7P80098 99 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CDK3Q00526 305 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 GBE1Q04446 702 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 ILF3Q12906 894 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 PTPRRQ15256 657 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 Q6ZVL8 140 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCNJLQ8IV13 435 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 VSTM4Q8IW00 320 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 SPACA3Q8IXA5 215 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 RHOT2Q8IXI1 618 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCDC13Q8IYE1 715 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 ARL14Q8N4G2 192 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 LPCAT1Q8NF37 534 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCL4L1Q8NHW4 92 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 KCNE4Q8WWG9 221 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 AP2M1Q96CW1 435 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 SCRN2Q96FV2 425 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 MAK16Q9BXY0 300 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 GSDMCQ9BYG8 508 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 FOXP3Q9BZS1 431 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 STRADBQ9C0K7 418 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 SEPT10Q9P0V9 454 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 RABGEF1Q9UJ41 708 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 DNPEPQ9ULA0 475 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 NENFQ9UMX5 172 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CHKBQ9Y259 395 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 HEY1Q9Y5J3 304 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 A0A0J9YYE9 177 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 CAPN8A6NHC0 703 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 AGRPO00253 132 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 KLK10O43240 276 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 DXOO77932 396 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 TRBC1P01850 177 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 GLB1P16278 677 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNF30P17039 623 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 CES1P23141 567 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 INHBCP55103 352 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 ERVPABLB-1P60509 514 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 TLE3Q04726 772 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 AP1B1Q10567 949 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 MAP9Q49MG5 647 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 C14orf28Q4W4Y0 310 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC30A9Q6PML9 568 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 JAMLQ86YT9 394 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 RFX6Q8HWS3 928 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 CNGA4Q8IV77 575 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 GPR156Q8NFN8 814 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC35G2Q8TBE7 412 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 ZDHHC1Q8WTX9 485 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 PIH1D2Q8WWB5 315 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 RAPGEF5Q92565 580 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 MAML1Q92585 1016 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 FAF2Q96CS3 445 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 TMEM74Q96NL1 305 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 CHP1Q99653 195 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 TDRD1Q9BXT4 1180 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 TEX101Q9BY14 249 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 FRMD8Q9BZ67 464 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 CDH19Q9H159 772 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 LRRN3Q9H3W5 708 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 NHEJ1Q9H9Q4 299 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 PCDH9Q9HC56 1237 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 ASCL3Q9NQ33 180 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 DTLQ9NZJ0 730 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 AMACRQ9UHK6 382 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 SUFUQ9UMX1 484 aa9.63□□□□□ -0.87
NPLOC4-212ENST00000573328 C1orf232A0A0U1RR37 186 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 AKR1B15C9JRZ8 316 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TMX2-CTNND1H3BSU7 103 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 KCNK1O00180 336 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 NTN3O00634 580 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 APOL1O14791 398 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PPP1R12AO14974 1030 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 INPP4BO15327 924 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SPOPO43791 374 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 FZD6O60353 706 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 NOBOXO60393 691 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TNFSF15O95150 251 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ASMTLO95671 621 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 JCHAINP01591 159 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC4A1P02730 911 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 CEACAM5P06731 702 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PYGLP06737 847 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 JMJD7P0C870 316 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms