RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 C8orf48Q96LL4 319 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 SEPT5Q99719 369 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CIB1Q99828 191 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CCSER2Q9H7U1 834 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 COQ10BQ9H8M1 238 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 BTRCQ9Y297 605 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 SRP72O76094 671 aaKnown RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 GFAPP14136 432 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 NELFEP18615 380 aaKnown RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 IL10RBQ08334 325 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 GRB7Q14451 532 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TRIP4Q15650 581 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 COLGALT2Q8IYK4 626 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 CLYBLQ8N0X4 340 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TRPC4APQ8TEL6 797 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TWIST2Q8WVJ9 160 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 NCSTNQ92542 709 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TADA1Q96BN2 335 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 PRICKLE1Q96MT3 831 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 SMIM14Q96QK8 99 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 TRIM8Q9BZR9 551 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.61
RPAIN-212ENST00000573126 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 ZFYVE28Q9HCC9 887 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 CD300AQ9UGN4 299 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 SARDHQ9UL12 918 aa11.21□□□□□ -0.61
RPAIN-212ENST00000573126 CCDC160A6NGH7 325 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 ZNF839A8K0R7 811 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 KIF3CO14782 793 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 CHRM3P20309 590 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 PBX3P40426 434 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 GRIA3P42263 894 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 RPL5P46777 297 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 KCNQ1P51787 676 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 YBX1P67809 324 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 ECT2LQ008S8 904 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 RBBP5Q15291 538 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 CYTH1Q15438 398 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 SLC5A9Q2M3M2 681 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 NADK2Q4G0N4 442 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 FAM171A1Q5VUB5 890 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 NADSYN1Q6IA69 706 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 OR4L1Q8NH43 312 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 FATE1Q969F0 183 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 NOL11Q9H8H0 719 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 MRPL40Q9NQ50 206 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 CATSPERZQ9NTU4 200 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 MRGBPQ9NV56 204 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 TMEM181Q9P2C4 612 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.62
RPAIN-212ENST00000573126 PATJQ8NI35 1801 aa11.21□□□□□ -0.62
RPAIN-212ENST00000573126 A0A1B0GVG6 124 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SMIM31A0A1B0GVY4 71 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 NCF1BA6NI72 391 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 NCF1CA8MVU1 366 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 TIPRLO75663 272 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 RPP40O75818 363 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 FAM58BPP0C7Q3 252 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 LINC00032P0C843 101 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 NCF1P14598 390 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 GPX3P22352 226 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SLC26A3P40879 764 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 NFKB2Q00653 900 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 MAP7D1Q3KQU3 841 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 PARP15Q460N3 678 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SAMD4BQ5PRF9 694 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 RBM44Q6ZP01 1051 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 MYO1HQ8N1T3 1032 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 LINC01599Q8WXQ3 324 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SLC29A1Q99808 456 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SEMA4BQ9NPR2 832 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 COMMD3-BMI1R4GMX3 469 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 DOCK4Q8N1I0 1966 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SUPT3HB4E1H0 165 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 AZIN1O14977 448 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SUPT3HO75486 399 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 CAPNS1P04632 268 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 FGF1P05230 155 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 RPLP2P05387 115 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 SERPINF2P08697 491 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 CKMT2P17540 419 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 PSMC3P17980 439 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 HLA-DPA1P20036 260 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 CAPN3P20807 821 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 PAX3P23760 479 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 FMO4P31512 558 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 STC1P52823 247 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 ACVR1Q04771 509 aa11.2□□□□□ -0.62
RPAIN-212ENST00000573126 CAPRIN1Q14444 709 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 TRIM71Q2Q1W2 868 aaKnown RBP11.2□□□□□ -0.62
RPAIN-212ENST00000573126 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms