RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ALG3Q92685 438 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 QKIQ96PU8 341 aaKnown RBP eCLIP13.02□□□□□ -0.332e-10■■■□□ 19.2
CNOT1-220ENST00000569916 TRIB3Q96RU7 358 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 BOCQ9BWV1 1114 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 HEMGNQ9BXL5 484 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 TEX101Q9BY14 249 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 SLC25A51Q9H1U9 297 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 TPRP12270 2363 aaKnown RBP13.02□□□□□ -0.33
CNOT1-220ENST00000569916 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.33
CNOT1-220ENST00000569916 USP24Q9UPU5 2620 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 KMT2BQ9UMN6 2715 aaPredicted RBP13.01□□□□□ -0.33
CNOT1-220ENST00000569916 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 TMEM8BA6NDV4 472 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 APOC4-APOC2K7ER74 178 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 YY2O15391 372 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 CLDN7O95471 211 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 SOD1P00441 154 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 APOC2P02655 101 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 KELP23276 732 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 TEAD1P28347 426 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 CD68P34810 354 aaPredicted RBP13.01□□□□□ -0.33
CNOT1-220ENST00000569916 PTPN7P35236 360 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 CDK3Q00526 305 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 DPTQ07507 201 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 KIF5AQ12840 1032 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 GALNT3Q14435 633 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 NOMO1Q15155 1222 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 TCEA2Q15560 299 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 CDKN3Q16667 212 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 ST3GAL2Q16842 350 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 HES3Q5TGS1 186 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 RAET1GQ6H3X3 334 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 ZNF765Q7L2R6 523 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 RD3Q7Z3Z2 195 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 TEKT5Q96M29 485 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 ABCG8Q9H221 673 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 GLOD4Q9HC38 313 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 MRPL40Q9NQ50 206 aaKnown RBP13.01□□□□□ -0.33
CNOT1-220ENST00000569916 PHPT1Q9NRX4 125 aaPredicted RBP13.01□□□□□ -0.33
CNOT1-220ENST00000569916 CD84Q9UIB8 345 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 EFR3BQ9Y2G0 817 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 DGKBQ9Y6T7 804 aa13.01□□□□□ -0.33
CNOT1-220ENST00000569916 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 PRSS38A1L453 326 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA6CA6NDK9 693 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA6BA6NDN3 693 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 HACD1B0YJ81 288 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 ANKRD66B4E2M5 251 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 TNFRSF10CO14798 259 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 MTSS1O43312 755 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 MT-CYBP00156 380 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 TNFP01375 233 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 CAPNS1P04632 268 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GP1BAP07359 652 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 ANXA6P08133 673 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA6DP0CG33 693 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 CTSEP14091 401 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 NFKB1P19838 968 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 DUSP3P51452 185 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 RWDD2BP57060 319 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GSDMDP57764 484 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 INSM1Q01101 510 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 CAMK2BQ13554 666 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 ELOCQ15369 112 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 SLC35F3Q8IY50 421 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 RAVER1Q8IY67 606 aaKnown RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 TXLNBQ8N3L3 684 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 KDF1Q8NAX2 398 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 SCAMP4Q969E2 229 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 AP2M1Q96CW1 435 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 MLPHQ9BV36 600 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 ADGRE3Q9BY15 652 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 FRMD8Q9BZ67 464 aaPredicted RBP13□□□□□ -0.33
CNOT1-220ENST00000569916 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA6AQ9NYA3 693 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 NCKIPSDQ9NZQ3 722 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 AMFRQ9UKV5 643 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
CNOT1-220ENST00000569916 IGF2RP11717 2491 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 GOLGA4Q13439 2230 aaKnown RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 C1orf232A0A0U1RR37 186 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 EME2A4GXA9 379 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PDE2AO00408 941 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 CEACAM5P06731 702 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PYGMP11217 842 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 GPR1P46091 355 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 E2F1Q01094 437 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 OTUD4Q01804 1114 aaKnown RBP12.99□□□□□ -0.33
CNOT1-220ENST00000569916 CDK18Q07002 472 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 XRCC4Q13426 336 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 NR0B2Q15466 257 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 PCSK7Q16549 785 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
CNOT1-220ENST00000569916 GUSBP11Q6P575 273 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms