RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 HMGB4Q8WW32 186 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 EXOC4Q96A65 974 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 CABS1Q96KC9 395 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 RUNDC3BQ96NL0 473 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 NODALQ96S42 347 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 THUMPD3Q9BV44 507 aaKnown RBP4.87□□□□□ -1.63
CHD9-220ENST00000569794 SFXN1Q9H9B4 322 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 TCF7L2Q9NQB0 619 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 PCDHB16Q9NRJ7 776 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 ADPRHL2Q9NX46 363 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 IKBKGQ9Y6K9 419 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 SYNRGQ9UMZ2 1314 aa4.87□□□□□ -1.63
CHD9-220ENST00000569794 PNMA6EA0A0J9YXQ4 647 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 A0A0U1RQK1 487 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 ZNF320A2RRD8 509 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 PRR23AA6NEV1 266 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 A8MXE2 369 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 H0YAE9 185 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 MS4A18H0YCH9 400 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 VWA5AO00534 786 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 HNRNPRO43390 633 aaKnown RBP4.86□□□□□ -1.63
CHD9-220ENST00000569794 ALDOCP09972 364 aaKnown RBP4.86□□□□□ -1.63
CHD9-220ENST00000569794 GAP43P17677 238 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 PRKCHP24723 683 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 ITGB8P26012 769 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 SLC16A2P36021 539 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 LIMK1P53667 647 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 NFE2L1Q14494 772 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 GRM4Q14833 912 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 ZNF484Q5JVG2 852 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 MDGA2Q7Z553 956 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 METTL23Q86XA0 190 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 OTUD6BQ8N6M0 293 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 C10orf53Q8N6V4 93 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 LSM14AQ8ND56 463 aaKnown RBP4.86□□□□□ -1.63
CHD9-220ENST00000569794 LINS1Q8NG48 757 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 GRK7Q8WTQ7 553 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 IP6K1Q92551 441 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 HSPH1Q92598 858 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 PGAP3Q96FM1 320 aaPredicted RBP4.86□□□□□ -1.63
CHD9-220ENST00000569794 TSGA13Q96PP4 275 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 KLHL4Q9C0H6 718 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 B3GNT4Q9C0J1 378 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 OPA3Q9H6K4 179 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 C5AR2Q9P296 337 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 LIMA1Q9UHB6 759 aaKnown RBP4.86□□□□□ -1.63
CHD9-220ENST00000569794 CNTN6Q9UQ52 1028 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 TRIM17Q9Y577 477 aa4.86□□□□□ -1.63
CHD9-220ENST00000569794 KRT87PA6NCN2 255 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A18PA6NE21 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A16PA6NEW6 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 NPIPB15A6NHN6 443 aaPredicted RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 SAC3D1A6NKF1 404 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A9PA6NNJ1 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A5PA8MXJ8 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 MYO1GB0I1T2 1018 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 KIF28PB7ZC32 967 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 BUB3O43684 328 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 KERAO60938 352 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ENTPD3O75355 529 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 WEE2P0C1S8 567 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A15PP0C7V4 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM90A14PP0C7W9 464 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 PCP11498 1178 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 RARGP13631 454 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 EEF2P13639 858 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 IGFBP2P18065 325 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 TNFSF8P32971 234 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 BSGP35613 385 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 GP5P40197 560 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 GARSP41250 739 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 TNNT2P45379 298 aaPredicted RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 AMPHP49418 695 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ZNF805Q5CZA5 627 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 PLEKHS1Q5SXH7 462 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ERMARDQ5T6L9 678 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 GARNL3Q5VVW2 1013 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 INO80CQ6PI98 192 aaPredicted RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 PIWIL3Q7Z3Z3 882 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 GSDMBQ8TAX9 411 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAM216AQ8WUB2 273 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 RMDN1Q96DB5 314 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 FAR2Q96K12 515 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 APOLD1Q96LR9 279 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ADAD1Q96M93 576 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 TMEM237Q96Q45 408 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ABHD1Q96SE0 405 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 PKP4Q99569 1192 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 PAAF1Q9BRP4 392 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ANKRD2Q9GZV1 360 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 KAT14Q9H8E8 782 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 SDF2L1Q9HCN8 221 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ZNF304Q9HCX3 659 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 PFDN4Q9NQP4 134 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 AKAP7Q9P0M2 348 aaPredicted RBP4.85□□□□□ -1.63
CHD9-220ENST00000569794 BAG5Q9UL15 447 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 ATP6V0A2Q9Y487 856 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms