RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
LINC00556-201ENST00000569603 SYPL2Q5VXT5 272 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 USP30Q70CQ3 517 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 CHST9Q7L1S5 443 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TMEM110Q86TL2 294 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TAC4Q86UU9 113 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 CACUL1Q86Y37 369 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 LILRA2Q8N149 483 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 SIX6OS1Q8N1H7 587 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 WDTC1Q8N5D0 677 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 PNPLA1Q8N8W4 532 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 KIAA1524Q8TCG1 905 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 BIRC7Q96CA5 298 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 ALG14Q96F25 216 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 CFAP36Q96G28 342 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 RBM18Q96H35 190 aaKnown RBP6.29□□□□□ -1.4
LINC00556-201ENST00000569603 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
LINC00556-201ENST00000569603 SLC39A3Q9BRY0 314 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TRPM6Q9BX84 2022 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 CIPCQ9C0C6 399 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 LHX5Q9H2C1 402 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
LINC00556-201ENST00000569603 GAREM1Q9H706 876 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 LRRC4Q9HBW1 653 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TM9SF3Q9HD45 589 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TCF7L2Q9NQB0 619 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TM7SF3Q9NS93 570 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 ABCF3Q9NUQ8 709 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 GPATCH2Q9NW75 528 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 DKK3Q9UBP4 350 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 HESX1Q9UBX0 185 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 PFDN2Q9UHV9 154 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 NAALADL1Q9UQQ1 740 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 TLR6Q9Y2C9 796 aa6.29□□□□□ -1.4
LINC00556-201ENST00000569603 EPN1Q9Y6I3 576 aaPredicted RBP6.29□□□□□ -1.4
LINC00556-201ENST00000569603 COL27A1Q8IZC6 1860 aaPredicted RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 NBASA2RRP1 2371 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 A0A1W2PR77 199 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 FAM221AA4D161 298 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 BECN2A8MW95 431 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 MEI4A8MW99 385 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 AKR1B15C9JRZ8 316 aaPredicted RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 I6L893 689 aaPredicted RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 M0QYV0 167 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 PSMA7O14818 248 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 WNT9AO14904 365 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 FLRT2O43155 660 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 LATO43561 262 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TBL1XO60907 577 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 KRT38O76015 456 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CER1O95813 267 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CPP00450 1065 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 WNT1P04628 370 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 ATXN1LP0C7T5 689 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 LCP1P13796 627 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 FERP16591 822 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CD86P42081 329 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 MATKP42679 507 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 GALCP54803 685 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TAF5Q15542 800 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 SMAD1Q15797 465 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TUBB8Q3ZCM7 444 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 C5orf22Q49AR2 442 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 FNDC3BQ53EP0 1204 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 DCAF6Q58WW2 860 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CCDC122Q5T0U0 273 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TCERG1LQ5VWI1 586 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 RNF219Q5W0B1 726 aaPredicted RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 AP1ARQ63HQ0 302 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 DENND1BQ6P3S1 775 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CRTC1Q6UUV9 634 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 IL27RAQ6UWB1 636 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 LRSAM1Q6UWE0 723 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 LAYNQ6UX15 382 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 KANSL1Q7Z3B3 1105 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 GALNT13Q8IUC8 556 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 UNC45BQ8IWX7 931 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 AADATQ8N5Z0 425 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 HJURPQ8NCD3 748 aaPredicted RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 RNF139Q8WU17 664 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 PTPRN2Q92932 1015 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 SMARCE1Q969G3 411 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 IGSF8Q969P0 613 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 VOPP1Q96AW1 172 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 CNDP2Q96KP4 475 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 NT5C1BQ96P26 610 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 SLC2A13Q96QE2 648 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TSG101Q99816 390 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TACO1Q9BSH4 297 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 INTS2Q9H0H0 1204 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 SGK2Q9HBY8 427 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 GCM1Q9NP62 436 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 ACP6Q9NPH0 428 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 PAPOLBQ9NRJ5 636 aaKnown RBP6.28□□□□□ -1.4
LINC00556-201ENST00000569603 QPCTLQ9NXS2 382 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 SLCO3A1Q9UIG8 710 aa6.28□□□□□ -1.4
LINC00556-201ENST00000569603 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms