RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 DNAJB3Q8WWF6 145 aa21.55■■□□□ 1.04
DENND4A-208ENST00000568515 VPS50Q96JG6 964 aa21.55■■□□□ 1.04
DENND4A-208ENST00000568515 ZFP42Q96MM3 310 aa21.55■■□□□ 1.04
DENND4A-208ENST00000568515 PIP5K1BO14986 540 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 CDK14O94921 469 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 FGF4P08620 206 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SMIM10L2AP0DMW4 78 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SMIM10L2BP0DMW5 78 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 FCGR1AP12314 374 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SLC26A3P40879 764 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 CYP51A1Q16850 503 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 FGD3Q5JSP0 725 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 AARS2Q5JTZ9 985 aaKnown RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 KCTD8Q6ZWB6 473 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 FASTKD5Q7L8L6 764 aaKnown RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 LDB1Q86U70 411 aaPredicted RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 DDIASQ8IXT1 998 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 OR13J1Q8NGT2 312 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 PTERQ96BW5 349 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SMARCD1Q96GM5 515 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 PPP6CO00743 305 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 CLASP2O75122 1294 aaKnown RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 CD97P48960 835 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 TIGD7Q6NT04 549 aaPredicted RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 KDELC1Q6UW63 502 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 MOB2Q70IA6 237 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 ZNF354CQ86Y25 554 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 PHYKPLQ8IUZ5 450 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SH3RF2Q8TEC5 729 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 TWIST2Q8WVJ9 160 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 EXT2Q93063 718 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 PPP1R10Q96QC0 940 aaKnown RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 CATSPERBQ9H7T0 1116 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 ARNT2Q9HBZ2 717 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 MID1IP1Q9NPA3 183 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 SMPD3Q9NY59 655 aaPredicted RBP21.54■■□□□ 1.04
DENND4A-208ENST00000568515 PCDHA9Q9Y5H5 950 aa21.54■■□□□ 1.04
DENND4A-208ENST00000568515 INPP4BO15327 924 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 SNAP91O60641 907 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 SERPINH1P50454 418 aaKnown RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 GEN1Q17RS7 908 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 CYBRD1Q53TN4 286 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 PIM3Q86V86 326 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 COX4I2Q96KJ9 171 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 SEZ6LQ9BYH1 1024 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 TRIM8Q9BZR9 551 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 SLC38A7Q9NVC3 462 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 BOLA2-SMG1P6H3BVE0 249 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 AZIN1O14977 448 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 FGF10O15520 208 aaPredicted RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 MATN4O95460 622 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 MTHFD1P11586 935 aaKnown RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 RFC2P35250 354 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 FOXA1P55317 472 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 RAB15P59190 212 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 DUSP28Q4G0W2 176 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 IL31Q6EBC2 164 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 XKR5Q6UX68 686 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 GALNT7Q86SF2 657 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 TMEM86AQ8N2M4 240 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 ZBTB8BQ8NAP8 495 aaPredicted RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 OR52K2Q8NGK3 314 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 ASB2Q96Q27 587 aa21.53■■□□□ 1.04
DENND4A-208ENST00000568515 NAA50Q9GZZ1 169 aaKnown RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 TSPYL2Q9H2G4 693 aaPredicted RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 SDR39U1Q9NRG7 319 aaPredicted RBP21.53■■□□□ 1.04
DENND4A-208ENST00000568515 TRIM64BA6NI03 449 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 S1PR4O95977 384 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 CD247P20963 164 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 HOXC13P31276 330 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 FOXM1Q08050 763 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 CBX3Q13185 183 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 RPS6KA2Q15349 733 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 SPATS1Q496A3 300 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 SLC44A4Q53GD3 710 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 PTGR2Q8N8N7 351 aaPredicted RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 OR6P1Q8NGX9 317 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 ZFC3H1O60293 1989 aaKnown RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 PAGE1O75459 146 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 SIX3O95343 332 aaPredicted RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 INHBBP09529 407 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 LBPP18428 481 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 RPS9P46781 194 aaKnown RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 TMEM125Q96AQ2 219 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 TUBGCP3Q96CW5 907 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 PLEKHA8Q96JA3 519 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 YTHDF1Q9BYJ9 559 aaKnown RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 POLR3BQ9NW08 1133 aaPredicted RBP21.52■■□□□ 1.04
DENND4A-208ENST00000568515 CDH9Q9ULB4 789 aa21.52■■□□□ 1.04
DENND4A-208ENST00000568515 KANSL1LA0AUZ9 987 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 MBLAC1A4D2B0 266 aaPredicted RBP21.52■■□□□ 1.03
DENND4A-208ENST00000568515 SLC7A4O43246 635 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 IGLV3-25P01717 112 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 C21orf59P57076 290 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 TNK2Q07912 1038 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 BLOC1S3Q6QNY0 202 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 IFNEQ86WN2 208 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 MAGEE2Q8TD90 523 aaPredicted RBP21.52■■□□□ 1.03
DENND4A-208ENST00000568515 SLC25A51Q9H1U9 297 aa21.52■■□□□ 1.03
DENND4A-208ENST00000568515 TUBB1Q9H4B7 451 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms