RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 KCNE4Q8WWG9 221 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 PATE1Q8WXA2 126 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 SCRN2Q96FV2 425 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 HIC2Q96JB3 615 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 AGAP2Q99490 1192 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 CEP41Q9BYV8 373 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 POLR1EQ9GZS1 481 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 ABCG8Q9H221 673 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 CPNE5Q9HCH3 593 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 SUFUQ9UMX1 484 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 HYOU1Q9Y4L1 999 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 RNF215Q9Y6U7 377 aa12.21□□□□□ -0.45
GTF3C1-208ENST00000567843 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.46
GTF3C1-208ENST00000567843 A0A1W2PQ67 120 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 EIF4E1BA6NMX2 242 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 KCNK1O00180 336 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 NTN3O00634 580 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 CBFA2T2O43439 604 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 FZD6O60353 706 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 TCEA3O75764 348 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 JCHAINP01591 159 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 HOXC4P09017 264 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 KDELR1P24390 212 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 CDK3Q00526 305 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 PDK2Q15119 407 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 AMZ1Q400G9 498 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 C14orf28Q4W4Y0 310 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 SLC30A9Q6PML9 568 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 NRROSQ86YC3 692 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 CCNJLQ8IV13 435 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 CBARPQ8N350 705 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 LPCAT1Q8NF37 534 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 WDR36Q8NI36 951 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 SLC35G2Q8TBE7 412 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 ARRDC2Q8TBH0 407 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 MAML1Q92585 1016 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 AP2M1Q96CW1 435 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 DNAJC7Q99615 494 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 TEX101Q9BY14 249 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 LRRN3Q9H3W5 708 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 TSPY26PQ9H489 355 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 THSD1Q9NS62 852 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 ZNHIT6Q9NWK9 470 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 LRIT1Q9P2V4 623 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 HEY1Q9Y5J3 304 aa12.2□□□□□ -0.46
GTF3C1-208ENST00000567843 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 A0A0J9YYE9 177 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 D6RAR5 112 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TNFRSF10CO14798 259 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 INPP4BO15327 924 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CLDN7O95471 211 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 PRLP01236 227 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TRBC1P01850 177 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 KRT7P08729 469 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TMEM253P0C7T8 217 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CCNB1P14635 433 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 PTMSP20962 102 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CCNCP24863 283 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 NFKBIAP25963 317 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 INHBCP55103 352 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 DYNLT1P63172 113 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 PTSQ03393 145 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 ZBTB17Q13105 803 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CERCAMQ5T4B2 595 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 ARHGAP40Q5TG30 622 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 OGFOD3Q6PK18 319 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 NPNTQ6UXI9 565 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TMPRSS9Q7Z410 1059 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 KDELC2Q7Z4H8 507 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 JAMLQ86YT9 394 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 MAP7D3Q8IWC1 876 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 SLC46A1Q96NT5 459 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 RNF157Q96PX1 679 aa12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 RIOK2Q9BVS4 552 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 TDRD1Q9BXT4 1180 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 NHEJ1Q9H9Q4 299 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-208ENST00000567843 ABHD10Q9NUJ1 306 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms