RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CLPBQ9H078 707 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 POLR1BQ9H9Y6 1135 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 THSD1Q9NS62 852 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 FAM208BQ5VWN6 2430 aa16.71■□□□□ 0.27
USB1-211ENST00000565662 GPR89AB7ZAQ6 455 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 NUDT21O43809 227 aaKnown RBP16.7■□□□□ 0.26
USB1-211ENST00000565662 CSO75390 466 aaKnown RBP16.7■□□□□ 0.26
USB1-211ENST00000565662 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
USB1-211ENST00000565662 HLA-DQB2P05538 268 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 GPR89BP0CG08 455 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 LHCGRP22888 699 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 ETV3P41162 512 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 LSSP48449 732 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 STC1P52823 247 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 DSC2Q02487 901 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 C1orf61Q13536 156 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 KDM7AQ6ZMT4 941 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 RD3Q7Z3Z2 195 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 KATNAL2Q8IYT4 538 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 AVL9Q8NBF6 648 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 PLA2G15Q8NCC3 412 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 GPR156Q8NFN8 814 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 ARRDC2Q8TBH0 407 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 FGF11Q92914 225 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 TMEM74Q96NL1 305 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 PPP1R2P1Q96PQ5 205 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 CCDC3Q9BQI4 270 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 FRMD8Q9BZ67 464 aaPredicted RBP16.7■□□□□ 0.26
USB1-211ENST00000565662 STRADBQ9C0K7 418 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 TCEAL2Q9H3H9 227 aaPredicted RBP16.7■□□□□ 0.26
USB1-211ENST00000565662 RMI1Q9H9A7 625 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 CYP4F12Q9HCS2 524 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 FGF22Q9HCT0 170 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 VPS18Q9P253 973 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 APPL1Q9UKG1 709 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 SLC17A4Q9Y2C5 497 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 GPSM3Q9Y4H4 160 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 PCDHGA8Q9Y5G5 932 aa16.7■□□□□ 0.26
USB1-211ENST00000565662 GOLGA6CA6NDK9 693 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 TMEM202A6NGA9 273 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 C3orf70A6NLC5 250 aaPredicted RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 BTNL10A8MVZ5 291 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 HACD1B0YJ81 288 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 ANKRD66B4E2M5 251 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 GOLGA6DP0CG33 693 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 GM2AP17900 193 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 COMTP21964 271 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 ABCG1P45844 678 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 UCNP55089 124 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 PCBP4P57723 403 aaKnown RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 PPP2R5EQ16537 467 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 ISXQ2M1V0 245 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 TBC1D25Q3MII6 688 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 ZDHHC20Q5W0Z9 365 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 DENND2CQ68D51 928 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 OGFOD3Q6PK18 319 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 TECPR1Q7Z6L1 1165 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 GPBAR1Q8TDU6 330 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 OR1E3Q8WZA6 343 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 P3H4Q92791 437 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 LIN37Q96GY3 246 aaPredicted RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 CARS2Q9HA77 564 aaKnown RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 GOLGA6AQ9NYA3 693 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 NFKBIL1Q9UBC1 381 aaPredicted RBP16.69■□□□□ 0.26
USB1-211ENST00000565662 GULP1Q9UBP9 304 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 MOSPD1Q9UJG1 213 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 CHKBQ9Y259 395 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 EFR3BQ9Y2G0 817 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 ALG6Q9Y672 507 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 SPEGQ15772 3267 aa16.69■□□□□ 0.26
USB1-211ENST00000565662 APC2O95996 2303 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 C1orf232A0A0U1RR37 186 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 JCHAINP01591 159 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 SLC2A4P14672 509 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 FECHP22830 423 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 CD86P42081 329 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 CDKN2BP42772 138 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 DCDC1P59894 354 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 SLC10A2Q12908 348 aaPredicted RBP16.68■□□□□ 0.26
USB1-211ENST00000565662 BIRC2Q13490 618 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 TAZQ16635 292 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 C14orf28Q4W4Y0 310 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 TEX44Q53QW1 395 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 CRTC1Q6UUV9 634 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 Q6ZVL8 140 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 HSD11B1LQ7Z5J1 315 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 DAAM2Q86T65 1068 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 ARL14Q8N4G2 192 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 KYQ8NBH2 561 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 ZNF248Q8NDW4 579 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 FAM46DQ8NEK8 389 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 LPCAT1Q8NF37 534 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 WDR36Q8NI36 951 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms