RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ZBTB17Q13105 803 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 IHHQ14623 411 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 ELOCQ15369 112 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 LRRC66Q68CR7 880 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 PNCKQ6P2M8 343 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 DOK6Q6PKX4 331 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 KDELC2Q7Z4H8 507 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 HEATR4Q86WZ0 1026 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 FSTL5Q8N475 847 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 LRRC57Q8N9N7 239 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 FAM181AQ8N9Y4 354 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 OR56A4Q8NGH8 313 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 PIH1D2Q8WWB5 315 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 GLMNQ92990 594 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 NXPE2Q96DL1 559 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 PDLIM2Q96JY6 352 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 TSGA13Q96PP4 275 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 TRIM10Q9UDY6 481 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 GPR34Q9UPC5 381 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 BPTFQ12830 3046 aa13.63□□□□□ -0.23
VPS9D1-204ENST00000565023 GRID2IPA4D2P6 1211 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TPP1O14773 563 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 CASC3O15234 703 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 CAPNS1P04632 268 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TGM2P21980 687 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 KELP23276 732 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 RPIAP49247 311 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 GSE1Q14687 1217 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TAZQ16635 292 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 SLC9A4Q6AI14 798 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 ESRP1Q6NXG1 681 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TAF8Q7Z7C8 310 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 GKN2Q86XP6 184 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 CCDC50Q8IVM0 306 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 KYQ8NBH2 561 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 ARRDC2Q8TBH0 407 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 KIAA1524Q8TCG1 905 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 SCG3Q8WXD2 468 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 HAUS1Q96CS2 278 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 AGAP3Q96P47 875 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TDRD1Q9BXT4 1180 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TSGA10Q9BZW7 698 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 TMEM168Q9H0V1 697 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 SAE1Q9UBE0 346 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 PADI4Q9UM07 663 aa13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 ARHGEF17Q96PE2 2063 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-204ENST00000565023 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 ACACAQ13085 2346 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 A0A0J9YYE9 177 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 F5H423 210 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 NRDCO43847 1150 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 FZD6O60353 706 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 CLDN7O95471 211 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 TRBC1P01850 177 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 SLC4A1P02730 911 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 CA4P22748 312 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 GPR1P46091 355 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 MARCKSL1P49006 195 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 PPIDQ08752 370 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 GALNT3Q14435 633 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 PDK1Q15118 436 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 PCSK7Q16549 785 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 TRIM74Q86UV6 250 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 SFTPA2Q8IWL1 248 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 RNF10Q8N5U6 811 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 CCL4L1Q8NHW4 92 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 HNRNPLLQ8WVV9 542 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 KRT35Q92764 455 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 SCAMP4Q969E2 229 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 AP2M1Q96CW1 435 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 DEPDC7Q96QD5 511 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 MCCC1Q96RQ3 725 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 RBM15Q96T37 977 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 BOCQ9BWV1 1114 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 ABCG8Q9H221 673 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 CARS2Q9HA77 564 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 USP29Q9HBJ7 922 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 PCDHA3Q9Y5H8 950 aa13.61□□□□□ -0.23
VPS9D1-204ENST00000565023 ADAMTS20P59510 1910 aa13.6□□□□□ -0.23
VPS9D1-204ENST00000565023 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-204ENST00000565023 PRSS38A1L453 326 aa13.6□□□□□ -0.23
VPS9D1-204ENST00000565023 EME2A4GXA9 379 aaPredicted RBP13.6□□□□□ -0.23
VPS9D1-204ENST00000565023 B4DGG1 531 aa13.6□□□□□ -0.23
VPS9D1-204ENST00000565023 AGRPO00253 132 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms