RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ARMCX4Q5H9R4 360 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 UBXN11Q5T124 520 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CLEC20AQ6ZU45 233 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 KRT74Q7RTS7 529 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 IPMKQ8NFU5 416 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ACMSDQ8TDX5 336 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NT5C1AQ9BXI3 368 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RNF208Q9H0X6 261 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 VPS11Q9H270 941 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FZD8Q9H461 694 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TRIM39Q9HCM9 518 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PKP3Q9Y446 797 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGB5Q9Y5G0 923 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SCN8AQ9UQD0 1980 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 C3orf70A6NLC5 250 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 GPR89AB7ZAQ6 455 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SNX2O60749 519 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CYP1A1P04798 512 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 GPR89BP0CG08 455 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PDX1P52945 283 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 IHHQ14623 411 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 STARD3Q14849 445 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NCF4Q15080 339 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CDKL4Q5MAI5 379 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MMGT1Q8N4V1 131 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PPTC7Q8NI37 304 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PPWD1Q96BP3 646 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 SEC16BQ96JE7 1060 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SENP8Q96LD8 212 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TMEM245Q9H330 911 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 IL1RL2Q9HB29 575 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PSME2Q9UL46 239 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CLEC4EQ9ULY5 219 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 GNEQ9Y223 722 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 ARL5AQ9Y689 179 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RFPL2O75678 378 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PROSCO94903 275 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TRUB2O95900 331 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 EFNA1P20827 205 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 RPL10P27635 214 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 ALDH18A1P54886 795 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 PAGE2BQ5JRK9 111 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CYP4Z2PQ8N1L4 340 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 KRT78Q8N1N4 520 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SVOPQ8N4V2 548 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ULK4Q96C45 1275 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PHF21BQ96EK2 531 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 COPS7BQ9H9Q2 264 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 SMIM31A0A1B0GVY4 71 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 GPR182O15218 404 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PDE9AO76083 593 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 JUNP05412 331 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 CLDN10P78369 228 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RBP5P82980 135 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SEMA5AQ13591 1074 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ZNF484Q5JVG2 852 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RTP2Q5QGT7 225 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RASIP1Q5U651 963 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ANKS6Q68DC2 871 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SLC43A2Q8N370 569 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TCP10LQ8TDR4 215 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 RNF145Q96MT1 663 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CDK15Q96Q40 435 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 APBA2Q99767 749 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 DPYSL5Q9BPU6 564 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NTPCRQ9BSD7 190 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 RGS18Q9NS28 235 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 POLG2Q9UHN1 485 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TRHDEQ9UKU6 1024 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 AP4E1Q9UPM8 1137 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NRCAMQ92823 1304 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NPHS1O60500 1241 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 UBOX5O94941 541 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 KELP23276 732 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 NMBRP28336 390 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 THOP1P52888 689 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PSMD4P55036 377 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 TUBB3Q13509 450 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 DUSP28Q4G0W2 176 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 ALFQ53S48 1182 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 LDLRAD1Q5T700 205 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 TSHZ1Q6ZSZ6 1077 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 BNIPLQ7Z465 357 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 WDR49Q8IV35 697 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 MRPL41Q8IXM3 137 aaKnown RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 SHISA5Q8N114 240 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CACTIN-AS1Q8N1I8 211 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PLD5Q8N7P1 536 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 C12orf76Q8N812 135 aaPredicted RBP3.36□□□□□ -1.87
CHD9-213ENST00000564845 COLGALT1Q8NBJ5 622 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 VOPP1Q96AW1 172 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SLC22A18Q96BI1 424 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 SMOQ99835 787 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGB1Q9Y5G3 927 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 HEBP2Q9Y5Z4 205 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CXorf51AA0A1B0GTR3 108 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 LCHNA4D1U4 455 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 CENPXA8MT69 81 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FAM25AB3EWG3 89 aa3.36□□□□□ -1.87
CHD9-213ENST00000564845 FAM25CB3EWG5 89 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms