RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 UBA2Q9UBT2 640 aaPredicted RBP2.63□□□□□ -1.99
CHD9-209ENST00000564255 TUBE1Q9UJT0 475 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 RAP2CQ9Y3L5 183 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 INSL6Q9Y581 213 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 KAT6AQ92794 2004 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 GAGE12JA6NER3 117 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 TMEM202A6NGA9 273 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 WIPF3A6NGB9 483 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 PLRG1O43660 514 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 ATP2C2O75185 946 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 GPC4O75487 556 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NDUFB4O95168 129 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 IGLV2-14P01704 120 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 MMP9P14780 707 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 KRT2P35908 639 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 PRCPP42785 496 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 COMPP49747 757 aaPredicted RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 METAP2P50579 478 aaKnown RBP eCLIP2.62□□□□□ -1.99
CHD9-209ENST00000564255 GPR143P51810 404 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 KRTAP10-2P60368 255 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NHLH1Q02575 133 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 SREBF2Q12772 1141 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 FOXF2Q12947 444 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 COG2Q14746 738 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ARHGEF6Q15052 776 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ZNF66Q6ZN08 573 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 MTSS1LQ765P7 747 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 PATL1Q86TB9 770 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 ADIPOR2Q86V24 386 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 CCDC13Q8IYE1 715 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 SCYL3Q8IZE3 742 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 OR8H3Q8N146 312 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 GALNT16Q8N428 558 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 HORMAD2Q8N7B1 307 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 TC2NQ8N9U0 490 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NSMCE1Q8WV22 266 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ATP6V1E2Q96A05 226 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 OTULINQ96BN8 352 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ZNF419Q96HQ0 510 aaPredicted RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 VCPIP1Q96JH7 1222 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 AGAP2Q99490 1192 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NAA11Q9BSU3 229 aaPredicted RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 C2orf40Q9H1Z8 148 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ESRP2Q9H6T0 727 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 CYSLTR2Q9NS75 346 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 TRMT1Q9NXH9 659 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 DNAJB4Q9UDY4 337 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 STON1Q9Y6Q2 735 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 WDR17Q8IZU2 1322 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 H0Y626 953 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 SMAD9O15198 467 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 ATG13O75143 517 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 MTA2O94776 668 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 IFNA2P01563 188 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 CCDC175P0C221 793 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ANXA7P20073 488 aaKnown RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 ADORA2A-AS1P86434 159 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 COL10A1Q03692 680 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 DUSP6Q16828 381 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NUGGCQ68CJ6 796 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 C11orf88Q6PI97 169 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 SLC2A7Q6PXP3 512 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 TAOK1Q7L7X3 1001 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ARHGEF25Q86VW2 580 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 FAM217AQ8IXS0 508 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 SLC44A5Q8NCS7 719 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 FER1L6-AS2Q96M78 137 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 DACH2Q96NX9 599 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 RAB3IPQ96QF0 476 aaPredicted RBP2.62□□□□□ -1.99
CHD9-209ENST00000564255 SIGLEC11Q96RL6 698 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 FAM118BQ9BPY3 351 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 NPFFR1Q9GZQ6 430 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ABCF3Q9NUQ8 709 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 GTF3C4Q9UKN8 822 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 ERVK-11Q9UQG0 969 aa2.62□□□□□ -1.99
CHD9-209ENST00000564255 POLR2AP24928 1970 aaKnown RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 C1orf226A1L170 272 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 URADA6NGE7 173 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 A6NL46 340 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 ZNF814B7Z6K7 855 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 AKR1B15C9JRZ8 316 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 VCYO14598 125 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 WNT9BO14905 357 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 MDM4O15151 490 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 RECQL5O94762 991 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 RGS11O94810 467 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 ADRB1P08588 477 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 TFPIP10646 304 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 BUD31P41223 144 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 PPP3CCP48454 512 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 PROK1P58294 105 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 GHRHRQ02643 423 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 ST3GAL1Q11201 340 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 SLC10A2Q12908 348 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 DHRS7BQ6IAN0 325 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 ZNF782Q6ZMW2 699 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 MRGPRGQ86SM5 289 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 ZBTB8BQ8NAP8 495 aaPredicted RBP2.61□□□□□ -1.99
CHD9-209ENST00000564255 AGBL3Q8NEM8 1001 aa2.61□□□□□ -1.99
CHD9-209ENST00000564255 OR10S1Q8NGN2 331 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms