RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 LEKR1Q6ZMV7 388 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 CACUL1Q86Y37 369 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 PGBD5Q8N414 524 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBFD1-203ENST00000564106 ISG20Q96AZ6 181 aaKnown RBP9.78□□□□□ -0.84
UBFD1-203ENST00000564106 ALG14Q96F25 216 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
UBFD1-203ENST00000564106 GABRG3Q99928 467 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 APOL2Q9BQE5 337 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 FAM167BQ9BTA0 163 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 ABCB8Q9NUT2 735 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 HACD3Q9P035 362 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 SLC25A13Q9UJS0 675 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 RIMKLBQ9ULI2 386 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 STARD13Q9Y3M8 1113 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 CHD6Q8TD26 2715 aa9.78□□□□□ -0.84
UBFD1-203ENST00000564106 ZCWPW2A0A1B0GU75 182 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 TMEM120BA0PK00 339 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 TM9SF1O15321 606 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 TIMM44O43615 452 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 SOCS5O75159 536 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 KCNK5O95279 499 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CRTAMO95727 393 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 IGSF6O95976 241 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 PMLP29590 882 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 NTSR1P30989 418 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 DGKGP49619 791 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 SCNN1BP51168 640 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CSE1LP55060 971 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 RPL26P61254 145 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 GNGT1P63211 74 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 LMAN2Q12907 356 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 EFTUD2Q15029 972 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CYTH1Q15438 398 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 SIRPB2Q5JXA9 342 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 PSAPL1Q6NUJ1 521 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 TRMT10BQ6PF06 316 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CYP2U1Q7Z449 544 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 AHI1Q8N157 1196 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF366Q8N895 744 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 ACMSDQ8TDX5 336 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 WFIKKN2Q8TEU8 576 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 DYDC1Q8WWB3 177 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CABS1Q96KC9 395 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CEP44Q9C0F1 390 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 IQCGQ9H095 443 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 MTG2Q9H4K7 406 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 PLAC1Q9HBJ0 212 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 KCNK9Q9NPC2 374 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CHRAC1Q9NRG0 131 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 C20orf96Q9NUD7 363 aaPredicted RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 PIH1D1Q9NWS0 290 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 MKS1Q9NXB0 559 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 GGA2Q9UJY4 613 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 RPL26L1Q9UNX3 145 aaKnown RBP9.77□□□□□ -0.85
UBFD1-203ENST00000564106 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 HS3ST2Q9Y278 367 aa9.77□□□□□ -0.85
UBFD1-203ENST00000564106 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 MUSKO15146 869 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 RHOBTB1O94844 696 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 ASLP04424 464 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 ATXN1LP0C7T5 689 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PABPC1P11940 636 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 HLA-EP13747 358 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 CHN1P15882 459 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 KRT4P19013 534 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 GLDCP23378 1020 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 MAOBP27338 520 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 LSP1P33241 339 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 NNMTP40261 264 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 GRIA4P48058 902 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 POLD2P49005 469 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 NUMBP49757 651 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 COPAP53621 1224 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 SNRPD1P62314 119 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 RAD51Q06609 339 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 OLIG2Q13516 323 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 THOC5Q13769 683 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 ENPP2Q13822 863 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 SEPT6Q14141 434 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 FUT11Q495W5 492 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TRIM61Q5EBN2 209 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PITRM1Q5JRX3 1037 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 FAM182AQ5T1J6 154 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TSTD2Q5T7W7 516 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PEAR1Q5VY43 1037 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PACS1Q6VY07 963 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TIFABQ6ZNK6 161 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms