RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MCCC1Q96RQ3 725 aaPredicted RBP17.66■□□□□ 0.42
NME3-205ENST00000563854 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
NME3-205ENST00000563854 THSD1Q9NS62 852 aa17.66■□□□□ 0.42
NME3-205ENST00000563854 KCTD5Q9NXV2 234 aa17.66■□□□□ 0.42
NME3-205ENST00000563854 HEY1Q9Y5J3 304 aa17.66■□□□□ 0.42
NME3-205ENST00000563854 ASXL3Q9C0F0 2248 aa17.66■□□□□ 0.42
NME3-205ENST00000563854 BAHCC1Q9P281 2608 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 A0A1W2PNU3 283 aaPredicted RBP17.65■□□□□ 0.42
NME3-205ENST00000563854 PSMD11O00231 422 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 KRT1P04264 644 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 MX2P20592 715 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 CA4P22748 312 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 KDELR1P24390 212 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 CCNCP24863 283 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 GPR1P46091 355 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 PDX1P52945 283 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 SLC10A2Q12908 348 aaPredicted RBP17.65■□□□□ 0.42
NME3-205ENST00000563854 ODF2Q5BJF6 829 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 CCNJLQ8IV13 435 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 CCDC13Q8IYE1 715 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 GPR156Q8NFN8 814 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 FCRL3Q96P31 734 aaPredicted RBP17.65■□□□□ 0.42
NME3-205ENST00000563854 TEX101Q9BY14 249 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 FOXP3Q9BZS1 431 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 WDR70Q9NW82 654 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 DTLQ9NZJ0 730 aa17.65■□□□□ 0.42
NME3-205ENST00000563854 RP1P56715 2156 aa17.64■□□□□ 0.42
NME3-205ENST00000563854 D6RAR5 112 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 KCNK1O00180 336 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 FZD6O60353 706 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 DXOO77932 396 aaKnown RBP17.64■□□□□ 0.41
NME3-205ENST00000563854 POLD2P49005 469 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 ERVPABLB-1P60509 514 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 NIPAL4Q0D2K0 466 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 ILF3Q12906 894 aaKnown RBP eCLIP17.64■□□□□ 0.41
NME3-205ENST00000563854 C14orf28Q4W4Y0 310 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 SOWAHCQ53LP3 525 aaPredicted RBP17.64■□□□□ 0.41
NME3-205ENST00000563854 FAM182AQ5T1J6 154 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 B3GNT8Q7Z7M8 397 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 TRIM74Q86UV6 250 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 OR6C4Q8NGE1 309 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 PTCD2Q8WV60 388 aaKnown RBP17.64■□□□□ 0.41
NME3-205ENST00000563854 KCNE4Q8WWG9 221 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 AP2M1Q96CW1 435 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 HDAC11Q96DB2 347 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 TSGA13Q96PP4 275 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 RNF157Q96PX1 679 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 TDRD1Q9BXT4 1180 aaKnown RBP17.64■□□□□ 0.41
NME3-205ENST00000563854 FRMD8Q9BZ67 464 aaPredicted RBP17.64■□□□□ 0.41
NME3-205ENST00000563854 ABCG8Q9H221 673 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 LRRN3Q9H3W5 708 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 ASCL3Q9NQ33 180 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 SUFUQ9UMX1 484 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 RNF215Q9Y6U7 377 aa17.64■□□□□ 0.41
NME3-205ENST00000563854 CCDC187A0A096LP49 1063 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 A0A0J9YYE9 177 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 CAPN8A6NHC0 703 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 EIF4E1BA6NMX2 242 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 NTN3O00634 580 aaPredicted RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 NOBOXO60393 691 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 JCHAINP01591 159 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 TRBC1P01850 177 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 CEACAM5P06731 702 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 AK4P27144 223 aaPredicted RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 CD86P42081 329 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 DYNLT1P63172 113 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 CXADRP78310 365 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 TLE3Q04726 772 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 BIRC2Q13490 618 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 COL9A2Q14055 689 aaPredicted RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 IHHQ14623 411 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 CERCAMQ5T4B2 595 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 BROXQ5VW32 411 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 ALG1LQ6GMV1 187 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 SLC30A9Q6PML9 568 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 TECPR1Q7Z6L1 1165 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 RFX6Q8HWS3 928 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 WDR36Q8NI36 951 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 ARRDC2Q8TBH0 407 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 KIAA1524Q8TCG1 905 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 SCAMP4Q969E2 229 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 HIC2Q96JB3 615 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 BBC3Q96PG8 261 aaPredicted RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 ANP32EQ9BTT0 268 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 MAK16Q9BXY0 300 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 GSDMCQ9BYG8 508 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 CEP41Q9BYV8 373 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 PCDH9Q9HC56 1237 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 SPATS2LQ9NUQ6 558 aaKnown RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 SEPT10Q9P0V9 454 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 LRIT1Q9P2V4 623 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 ATXN7L1Q9ULK2 861 aaPredicted RBP17.63■□□□□ 0.41
NME3-205ENST00000563854 TMEM98Q9Y2Y6 226 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 PPIL1Q9Y3C6 166 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 HYOU1Q9Y4L1 999 aa17.63■□□□□ 0.41
NME3-205ENST00000563854 LOC400499M0QZD8 3231 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms