RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CDKN3Q16667 212 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 PARS2Q7L3T8 475 aaKnown RBP21.93■■□□□ 1.1
LINC01960-201ENST00000563759 TTC7BQ86TV6 843 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 HCAR2Q8TDS4 363 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 EZH1Q92800 747 aaPredicted RBP21.93■■□□□ 1.1
LINC01960-201ENST00000563759 PBXIP1Q96AQ6 731 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 ALKBH8Q96BT7 664 aaKnown RBP21.93■■□□□ 1.1
LINC01960-201ENST00000563759 PPP1R16AQ96I34 528 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 MCMBPQ9BTE3 642 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 PRSS16Q9NQE7 514 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 PPM1HQ9ULR3 514 aa21.93■■□□□ 1.1
LINC01960-201ENST00000563759 SMG5Q9UPR3 1016 aaKnown RBP21.93■■□□□ 1.1
LINC01960-201ENST00000563759 H7C0S8 307 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 TPP1O14773 563 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ITGB7P26010 798 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 GABRB3P28472 473 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 SERPINB8P50452 374 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 GRSF1Q12849 480 aaKnown RBP eCLIP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 SDCCAG8Q86SQ7 713 aaPredicted RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 LDB1Q86U70 411 aaPredicted RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 DCLK2Q8N568 766 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 GPR150Q8NGU9 434 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 PCDH12Q9NPG4 1184 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 DYRK4Q9NR20 520 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 PCMTD2Q9NV79 361 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 MTO1Q9Y2Z2 717 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 FAM47DPA6NHR8 397 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 C1QTNF3-AMACRE9PGA6 284 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 RFPL1O75677 317 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 EGFP01133 1207 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ALDOAP04075 364 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 IL9P15248 144 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 OGNP20774 298 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 PMLP29590 882 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 LEPRP48357 1165 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ENPP2Q13822 863 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 C2orf27AQ580R0 203 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ZRANB3Q5FWF4 1079 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 TMEM196Q5HYL7 178 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ERAP2Q6P179 960 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 TIFABQ6ZNK6 161 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 MMAAQ8IVH4 418 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 ANKRD42Q8N9B4 389 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 MDM1Q8TC05 714 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 FAM129BQ96TA1 746 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 GPR22Q99680 433 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 SSU72Q9NP77 194 aaKnown RBP21.92■■□□□ 1.1
LINC01960-201ENST00000563759 NKIRAS1Q9NYS0 192 aa21.92■■□□□ 1.1
LINC01960-201ENST00000563759 PRPF4O43172 522 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC01960-201ENST00000563759 HAUS5O94927 633 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 CHN1P15882 459 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 TIMP2P16035 220 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 DRD1P21728 446 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 VIPR1P32241 457 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 PSMD8P48556 350 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 STC1P52823 247 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 METAP1P53582 386 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 TFF2Q03403 129 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 PUS10Q3MIT2 529 aaKnown RBP21.91■■□□□ 1.1
LINC01960-201ENST00000563759 HABP4Q5JVS0 413 aaKnown RBP21.91■■□□□ 1.1
LINC01960-201ENST00000563759 GALNT7Q86SF2 657 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 APOPT1Q96IL0 206 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 C19orf43Q9BQ61 176 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 SLC30A1Q9Y6M5 507 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 PLXNA2O75051 1894 aa21.91■■□□□ 1.1
LINC01960-201ENST00000563759 SYNCRIPO60506 623 aaKnown RBP21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SRFP11831 508 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 ZNF30P17039 623 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 TYK2P29597 1187 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 FOXN2P32314 431 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 TDGQ13569 410 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 PEX6Q13608 980 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SEMA3AQ14563 771 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 FBXL19Q6PCT2 694 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 CNSTQ6PJW8 725 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 FAM151BQ6UXP7 276 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 PNPLA1Q8N8W4 532 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 GPATCH11Q8N954 259 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 BANPQ8N9N5 519 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 MGARPQ8TDB4 240 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SGSM3Q96HU1 749 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 IQCGQ9H095 443 aaKnown RBP21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SLC39A10Q9ULF5 831 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 PLXNB3Q9ULL4 1909 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 FAM95CA0A1B0GW59 222 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 COPEO14579 308 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 TYROBPO43914 113 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 PRAMEF1O95521 474 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 PRSS56P0CW18 603 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 CHRM1P11229 460 aaPredicted RBP21.9■■□□□ 1.1
LINC01960-201ENST00000563759 BPIP17213 487 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SAT1P21673 171 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SPAM1P38567 509 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 ZNF789Q5FWF6 425 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SDE2Q6IQ49 451 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 CMC1Q7Z7K0 106 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC01960-201ENST00000563759 ARRDC3Q96B67 414 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 CAB39LQ9H9S4 337 aa21.9■■□□□ 1.1
LINC01960-201ENST00000563759 SNX15Q9NRS6 342 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms