RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RAB10P61026 200 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 XIAPP98170 497 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 POU4F1Q01851 419 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 SEMG2Q02383 582 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 SF3A3Q12874 501 aaKnown RBP eCLIP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 TYSND1Q2T9J0 566 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 FASTKD1Q53R41 847 aaKnown RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 GDPD4Q6W3E5 623 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 SDCCAG8Q86SQ7 713 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 YAF2Q8IY57 180 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 DOCK8Q8NF50 2099 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 GRIN3AQ8TCU5 1115 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 KLHL32Q96NJ5 620 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 MANSC1Q9H8J5 431 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 TLK1Q9UKI8 766 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 FNDC3AQ9Y2H6 1198 aaKnown RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 WASF2Q9Y6W5 498 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 C1orf232A0A0U1RR37 186 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 NPIPB15A6NHN6 443 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-208ENST00000563220 PROCP04070 461 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 CTSLP07711 333 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 STMN1P16949 149 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 BGNP21810 368 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 GJA4P35212 333 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 STC1P52823 247 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 HECTD2Q5U5R9 776 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 ZNF549Q6P9A3 640 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 CRTC1Q6UUV9 634 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 FAM47EQ6ZV65 393 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 PIGWQ7Z7B1 504 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 TSPAN33Q86UF1 283 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 PIANPQ8IYJ0 282 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 CPA6Q8N4T0 437 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 CHFRQ96EP1 664 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 SCRN2Q96FV2 425 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 LYSMD1Q96S90 227 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 FAM96AQ9H5X1 160 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 PLA2G4CQ9UP65 541 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 VWA7Q9Y334 891 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 PKP3Q9Y446 797 aa18.03■□□□□ 0.48
COMMD4-208ENST00000563220 DNAJC6O75061 913 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 LEFTY1O75610 366 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 GSTA1P08263 222 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 CRABP2P29373 138 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 PMLP29590 882 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 MTHFRP42898 656 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 ARSIQ5FYB1 569 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 PSAPL1Q6NUJ1 521 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 ELAC2Q9BQ52 826 aaKnown RBP18.02■□□□□ 0.48
COMMD4-208ENST00000563220 SLC8A2Q9UPR5 921 aa18.02■□□□□ 0.48
COMMD4-208ENST00000563220 ANTXRLA6NF34 631 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 BPGMP07738 259 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 GDI1P31150 447 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 CDKN2DP55273 166 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 ST8SIA6P61647 398 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 CGB2Q6NT52 195 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 C10orf67Q8IYJ2 551 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 CENPLQ8N0S6 344 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-208ENST00000563220 CCDC63Q8NA47 563 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 MCCC1Q96RQ3 725 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-208ENST00000563220 PITPNM3Q9BZ71 974 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 BRD9Q9H8M2 597 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 ANKRD6Q9Y2G4 727 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 ACOT9Q9Y305 439 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 SPTBN5Q9NRC6 3674 aaKnown RBP18.01■□□□□ 0.47
COMMD4-208ENST00000563220 GPR39O43194 453 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 DLG1Q12959 904 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 COL19A1Q14993 1142 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 LRIT3Q3SXY7 679 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 TAF1BQ53T94 588 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-208ENST00000563220 ZRANB3Q5FWF4 1079 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 LRRC73Q5JTD7 316 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 CES4AQ5XG92 561 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 TPRG1Q6ZUI0 275 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 NUDCD3Q8IVD9 361 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 SPATA6LQ8N4H0 392 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 TERB1Q8NA31 727 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 KCTD4Q8WVF5 259 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 SEC16BQ96JE7 1060 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 SIRPGQ9P1W8 387 aa18.01■□□□□ 0.47
COMMD4-208ENST00000563220 TBC1D3BA6NDS4 549 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 GAPDHSO14556 408 aaPredicted RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 ECI2O75521 394 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 NEFHP12036 1026 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 LHCGRP22888 699 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 SLC12A2P55011 1212 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 TIAL1Q01085 375 aaKnown RBP eCLIP18■□□□□ 0.47
COMMD4-208ENST00000563220 USP45Q70EL2 814 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 SMRP1Q8NCR6 262 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 PPM1EQ8WY54 764 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 LPGAT1Q92604 370 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 GPR78Q96P69 363 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 TCF12Q99081 682 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 TRMT61BQ9BVS5 477 aaKnown RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 NSRP1Q9H0G5 558 aaKnown RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 INTS10Q9NVR2 710 aaKnown RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 IL36AQ9UHA7 158 aa18■□□□□ 0.47
COMMD4-208ENST00000563220 RUVBL2Q9Y230 463 aaKnown RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 MTF2Q9Y483 593 aaPredicted RBP18■□□□□ 0.47
COMMD4-208ENST00000563220 ARNTLO00327 626 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms